In the article, the fractal approach to the description of nonequilibrium water ecosystems in their exploitation conditions is considered. The article demonstrates clearly that, in these conditions, the management of the development of water objects should be a precautionary provision, which should furthermore be reduced to the management of potential anthropogenic risks arising from a violation of the coevolution of anthropogenic and natural processes equivalent to the disruption in sustainability of the ecosystem in its exploitation conditions. The fractal approach opens up new opportunities for the assessment of water management based on the calculation of the fractal sustainability indicator (anthropogenic transformation) for water ecosystems that is directly related to the maximum permissible environmental load (MPEL).