Persistent organic pollutants (POPs) monitoring and management in typical semi-enclosed bays is a major global environmental issue. This study concentrated on a questionnaire survey and analysis of marine environmental management and monitoring departments at all levels in China, and proposed suggestions on the construction and improvement of POPs monitoring and management system. Results show that POPs are initially involved in China’s current marine environmental monitoring system, and the monitoring strength and capability still need to be continuously improved, mainly in the recognition, funding input, relevant standards, monitoring, and evaluation technical regulations of marine environmental POPs monitoring. Therefore, in order to gradually improve the monitoring and management system of China’s offshore marine environment POPs, this study suggests starting from four directions: (1) Building POPs monitoring system of a marine ecological environment, and strengthening POPs monitoring in different environmental media; (2) strengthening land-based POPs emission and the related human activities’ intensity survey, and establishing a POPs information sharing database; (3) optimizing POPs monitoring technology in the marine environment, and improving POPs supervision and management technical support system; and (4) participating in regional and international marine environment POPs monitoring and evaluation projects, and strengthening the construction of talent teams.