Performance of Individual Tree Segmentation Algorithms in Forest Ecosystems Using UAV LiDAR Data

Abstract

Forests are crucial for biodiversity, climate regulation, and hydrological cycles, requiring sustainable management due to threats like deforestation and climate change. Traditional forest monitoring methods are labor-intensive and limited, whereas UAV LiDAR offers detailed three-dimensional data on forest structure and extensive coverage. This study primarily assesses individual tree segmentation algorithms in two forest ecosystems with different levels of complexity using high-density LiDAR data captured by the Zenmuse L1 sensor on a DJI Matrice 300RTK platform. The processing methodology for LiDAR data includes preliminary preprocessing steps to create Digital Elevation Models, Digital Surface Models, and Canopy Height Models. A comprehensive evaluation of the most effective techniques for classifying ground points in the LiDAR point cloud and deriving accurate models was performed, concluding that the Triangular Irregular Network method is a suitable choice. Subsequently, the segmentation step is applied to enable the analysis of forests at the individual tree level. Segmentation is crucial for monitoring forest health, estimating biomass, and understanding species composition and diversity. However, the selection of the most appropriate segmentation technique remains a hot research topic with a lack of consensus on the optimal approach and metrics to be employed. Therefore, after the review of the state of the art, a comparative assessment of four common segmentation algorithms (Dalponte2016, Silva2016, Watershed, and Li2012) was conducted. Results demonstrated that the Li2012 algorithm, applied to the normalized 3D point cloud, achieved the best performance with an F1-score of 91% and an IoU of 83%.