Phylogenetic analysis and taxonomic study of marine Cytophaga-like bacteria: proposal for Tenacibaculum gen. nov. with Tenacibaculum maritimum comb. nov. and Tenacibaculum ovolyticum comb. nov., and description of Tenacibaculum mesophilum sp. nov. and Tenacibaculum amylolyticum sp. nov.

Suzuki, Makoto; Nakagawa, Yasuyoshi; Harayama, Shigeaki; Yamamoto, Satoshi

doi:10.1099/00207713-51-5-1639

Cited by 374 publications

(238 citation statements)

References 44 publications

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“…1). The clustering of strain YKTF-3 T and the type strains of T. gallaicum, T. discolor, T. litoreum and T. ascidiaceicola was also found in the trees reconstructed using the maximumlikelihood and maximum-parsimony algorithms (Figs S2 and S3 The predominant isoprenoid quinone detected in strain YKTF-3 T was menaquinone-6 (MK-6), in line with data for the genus Tenacibaculum (Suzuki et al, 2001) and all other members of the family Flavobacteriaceae (Bernardet, 2011).…”

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confidence: 49%

“…html; Parte, 2014;Kim et al, 2016). Members of the genus Tenacibaculum have been isolated from a variety of marine environments and marine organisms (Suzuki et al, 2001;Frette et al, 2004;Yoon et al, 2005;Sheu et al, 2007;Heindl et al, 2008;Piñeiro-Vidal et al, 2008Wang et al, 2008;Lee et al, 2009;Oh et al, 2012;Li et al, 2013;Kim et al, 2013Kim et al, , 2016. The aim of the present work was to determine the exact taxonomic position of strain YKTF-3 T by using a polyphasic characterization.…”

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confidence: 99%

“…One of the bacterial strains isolated, designated YKTF-3 T , which is phylogenetically most closely affiliated to the genus Tenacibaculum, is described in this study. The genus Tenacibaculum, a member of the family Flavobacteriaceae within the phylum Bacteroidetes (Bernardet, 2011), was proposed by Suzuki et al (2001) through the reclassification of two Flexibacter species and the description of two novel species. At the time of writing, the genus Tenacibaculum comprises 22 species with validly published names (http://www.bacterio.net/tenacibaculum.…”

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confidence: 99%

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Tenacibaculum sediminilitoris sp. nov., isolated from a tidal flat

Park

Jung

et al. 2016

International Journal of Systematic and Evolutionary Microbiology

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A Gram-stain-negative, non-flagellated, non-gliding, non-spore-forming bacterial strain, designated YKTF-3 T , was isolated from a tidal flat on the Yellow Sea, South Korea. Strain YKTF-3 T grew optimally at 30 C and in the presence of 2.0-4.0 % (w/v) NaCl. Phylogenetic trees based on 16S rRNA gene sequences showed that strain YKTF-3 T fell within the clade comprising the type strains of Tenacibaculumspecies. The novel strain exhibited 16S rRNA gene sequence similarity values of 97.22-98.34 % to the type strains of Tenacibaculum gallaicum, Tenacibaculum ascidiaceicola, Tenacibaculum litoreum, Tenacibaculum discolor, Tenacibaculum aestuarii and Tenacibaculum lutimaris, and of 95.08-96.95 % to the type strains of the other Tenacibaculum species. Strain YKTF-3 T contained MK-6 as the predominant menaquinone and iso-C 15 : 0 , summed feature 3 (C 16 : 1 !7c and/or C 16 : 1 !6c) and iso-C 17 : 0 3-OH as the major fatty acids. The major polar lipids of strain YKTF-3 T were phosphatidylethanolamine, one unidentified lipid, one unidentified aminophospholipid, one unidentified glycolipid and one unidentified aminolipid. The DNA G+C content was 32.3 mol% and its mean DNA-DNA relatedness values with the type strains of the six phylogenetically closely relatedTenacibaculum species were 10-27 %. Differential phenotypic properties, together with phylogenetic and genetic distinctiveness, revealed that strain YKTF-3 T is separate from other recognized species of the genus Tenacibaculum. On the basis of the data presented, strain YKTF-3 T is considered to represent a novel species of the genus Tenacibaculum, for which the name Tenacibaculum sediminilitoris sp. nov. is proposed. The type strain is YKTF-3 T (=KCTC 52210 T =NBRC 111991 T ).

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Tenacibaculum sediminilitoris sp. nov., isolated from a tidal flat

Park

Jung

et al. 2016

International Journal of Systematic and Evolutionary Microbiology

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“…As an example, in 2001, Suzuki et al from the Kyowa Hakko Kogyo company published an article that utilized sequence information from five microbes isolated from Palauan sponges and algae that permitted the identification of a completely new taxon of bacteria, the genus Tenacibaculum. 39 …”

Section: Microbial Phylogeniesmentioning

confidence: 99%

Investigations of the Marine Flora and Fauna of the Islands of Palau

Faulkner¹,

Newman²,

Cragg³

2004

ChemInform

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“…Cell morphology and the presence of flagella were observed by transmission electron microscopy (JEM-1230; JEOL) when cells were in the exponential phase of growth on the MA plate at 30 C. Gliding motility was performed by the hanging-drop method (Suzuki, 2001). Poly-b-hydroxybutyrate (PHB) granules were assessed by staining with Sudan Black (Mesquita et al, 2015).…”

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Thalassobaculum fulvum sp. nov., isolated from deep seawater

Wang

Sun

et al. 2016

International Journal of Systematic and Evolutionary Microbiology

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A novel Gram-stain-negative, rod-shaped (1.0-1.2Â2.0-8.0 µm), non-motile without flagella strain, designated HSF7 T , was isolated from deep seawater. Strain HSF7 T was able to grow at 20-40 C (optimum 35 C), pH 5.5-9.0 (optimum pH 6.5) and 0-10 % (w/v) NaCl (optimum 2 %). The G+C content of the genomic DNA was 69 mol%. Bacteriochlorophyll a and poly-bhydroxybutyrate (PHB) granules were not found. The major fatty acids were C 18 : 1 !7c (69.3 %), C 16 : 0 (9.1 %) and C 19 : 0 cyclo !8c (6.6 %). The polar lipids were phosphatidylglycerol, three unknown aminophospholipids, an unknown phospholipid, an unknown aminolipid and two unknown lipids. The only isoprenoid quinone was Q-10. 16S rRNA gene sequence analysis revealed that strain HSF7 T was most closely related toThalassobaculum salexigens DSM 19539 T , Thalassobaculum litoreum DSM 18839 T , Nisaeadenitrificans DSM 18348 T and Oceanibaculum indicum MCCC 1A02083 T with pairwise sequence similarities of 95.56 %, 95.21 %, 93.64 % and 92.65 %, respectively. On the basis of genotypic, phenotypic, phylogenetic and chemotaxonomic characteristics, strain HSF7 T represents a novel species of the genus Thalassobaculum, or which the name Thalassobaculum fulvum sp. nov. is proposed. The type strain is HSF7 T (=KCTC 42651 T =MCCC 1K01158 T ).

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Phylogenetic analysis and taxonomic study of marine Cytophaga-like bacteria: proposal for Tenacibaculum gen. nov. with Tenacibaculum maritimum comb. nov. and Tenacibaculum ovolyticum comb. nov., and description of Tenacibaculum mesophilum sp. nov. and Tenacibaculum amylolyticum sp. nov.

Cited by 374 publications

References 44 publications

Tenacibaculum sediminilitoris sp. nov., isolated from a tidal flat

Tenacibaculum sediminilitoris sp. nov., isolated from a tidal flat

Investigations of the Marine Flora and Fauna of the Islands of Palau

Thalassobaculum fulvum sp. nov., isolated from deep seawater

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