2024
DOI: 10.1101/2024.04.08.588545
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Physiological and transcriptional changes associated with obligate aestivation in the cabbage stem flea beetle (Psylliodes chrysocephala)

Gozde Guney,
Doga Cedden,
Johannes Koernig
et al.

Abstract: Aestivation is a form of seasonal dormancy observed in various insect species, usually coinciding with the summer season. Psylliodes chrysocephala (Coleoptera: Chrysomelidae), the cabbage stem flea beetle, is a key pest of oilseed rape and obligatorily aestivates as adult in late summer. At present, our understanding of the physiological and transcriptional changes linked to aestivation in P. chrysocephala is still limited. In this study, physiological parameters and RNA-seq analyses were performed with labora… Show more

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Cited by 3 publications
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“…We used our de novo transcriptome assembly representing various adult stages of female CSFB with a BUSCO v5.4.2 (Manni et al, 2021) completeness score of 95.9% (S:94.5%, D: 1.4%, F: 1.8%, M: 2.3%, n: 2124, comparison against the endopterygota v4 dataset) (Güney et al ., 2024, NCBI BioProject: PRJNA930726, TSA: GKIH01000001:GKIH01098921 ) to identify candidate gene sequences. Orthofinder v2.5 (Emms & Kelly, 2019) with the default parameters was used to conduct orthology inference between the translated amino acid sequences from CSFB and Tribolium castaneum (Tcas5.2 from www.ibeetle-base.uni-goettingen.de).…”
Section: Methodsmentioning
confidence: 99%
“…We used our de novo transcriptome assembly representing various adult stages of female CSFB with a BUSCO v5.4.2 (Manni et al, 2021) completeness score of 95.9% (S:94.5%, D: 1.4%, F: 1.8%, M: 2.3%, n: 2124, comparison against the endopterygota v4 dataset) (Güney et al ., 2024, NCBI BioProject: PRJNA930726, TSA: GKIH01000001:GKIH01098921 ) to identify candidate gene sequences. Orthofinder v2.5 (Emms & Kelly, 2019) with the default parameters was used to conduct orthology inference between the translated amino acid sequences from CSFB and Tribolium castaneum (Tcas5.2 from www.ibeetle-base.uni-goettingen.de).…”
Section: Methodsmentioning
confidence: 99%