A polyphasic taxonomic study was carried out on strains CHu50b-3-2T and CHu40b-3-1 isolated from a 67 cm-long sediment core collected from the Daechung Reservoir at a water depth of 17 m, Daejeon, Republic of Korea. The cells of the strains were Gram-stain-negative, non-spore-forming, non-motile and rod-shaped. Comparative 16S rRNA gene sequence studies showed a clear affiliation of two strains with γ-Proteobacteria, which showed the highest pairwise sequence similarities to
Lysobacter hankyongensis
KTce-2T (96.5 %),
Lysobacter pocheonensis
Gsoil193T (96.3 %),
Lysobacter ginsengisoli
Gsoil 357T (96.1 %),
Lysobacter solanacearum
T20R-70T (96.1 %),
Lysobacter brunescens
KCTC 12130T (95.4 %) and
Lysobacter capsici
YC5194T (95.3 %). The phylogenetic analysis based on 16S rRNA gene sequences showed that the strains formed a clear phylogenetic lineage with the genus
Lysobacter
. The major fatty acids were identified as summed feature 9 (iso-C17 : 1
ω9c and/or C18 : 1 10-methyl), iso-C15 : 0, iso-C16 : 0 and iso-C17 : 0. The respiratory quinone was identified as ubiquinone Q-8. The major polar lipids were phosphatidylglycerol, diphosphatidylglycerol, phosphatidylethanolamine and an unidentified phospholipid. The genomic DNA G+C content was determined to be 66.8 mol% (genome) for strain CHu50b-3-2T and 66.4 mol% (HPLC) for strain CHu40b-3-1. Based on the combined genotypic and phenotypic data, we propose that strains CHu50b-3-2T and CHu40b-3-1 represent a novel species of the genus
Lysobacter
, for which the name Lysobacter profundi sp. nov. is proposed. The type strain is CHu50b-3-2T (=KCTC 72973T=CCTCC AB 2019129T). Besides
Lysobacter panaciterrae
Gsoil 068T formed a phylogenetic group together with strain
Luteimonas aquatica
RIB1-20T (EF626688) that is clearly separated from all other known
Lysobacter
strains. Based on the phylogenetic relationships together with fatty acid compositions,
Lysobacter panaciterrae
Gsoil 068T should be reclassified as a member of the genus Luteimonas: Luteimonas aquatica comb. nov. (type strain Gsoil 068T=KCTC 12601T=DSM 17927T).