2009
DOI: 10.1128/jcm.00998-09
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Rapid Multiplex Reverse Transcription-PCR Typing of Influenza A and B Virus, and Subtyping of Influenza A Virus into H1, 2, 3, 5, 7, 9, N1 (Human), N1 (Animal), N2, and N7, Including Typing of Novel Swine Origin Influenza A (H1N1) Virus, during the 2009 Outbreak in Milwaukee, Wisconsin

Abstract: A large outbreak of novel influenza A (H1N1) virus (swine origin influenza virus [S-OIV]) infection in

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Cited by 77 publications
(28 citation statements)
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“…As a result, specimens with negative RIDTs are usually tested subsequently by more sensitive culture or molecular assays. PCR-based molecular assays have shown excellent clinical utility for the detection and identification of influenza viruses; numerous FDA-cleared commercial devices are now available (18,23,24).…”
mentioning
confidence: 99%
“…As a result, specimens with negative RIDTs are usually tested subsequently by more sensitive culture or molecular assays. PCR-based molecular assays have shown excellent clinical utility for the detection and identification of influenza viruses; numerous FDA-cleared commercial devices are now available (18,23,24).…”
mentioning
confidence: 99%
“…Due to a seemingly constant increase in the number of outbreaks of highly pathogenic avian influenza (HPAI) caused by infections with subtype H5 or H7 viruses in many countries, RT-PCR and RT-qPCRs were especially designed for the broad detection and differentiation of these HA genes [18,[20][21][22] and their pathotypes on the basis of the HA cleavage site motif [23][24][25]. Often these assays are combined with a differentiation of the NA subtypes N1, N2, or N7 [26]. So far, only few studies have focused on the generic detection of the N9 gene [27] or the H7 gene [16,28].…”
Section: Discussionmentioning
confidence: 99%
“…For example, influenza A viral subtypes H1N1 H1N2, H2N1, H3N1, H3N2, and H2N3 are commonly associated with influenza infections in pigs. Other influenza A viral subtypes, including H9N2 and H5N1, are almost exclusively found in avian populations .…”
Section: Introductionmentioning
confidence: 99%