The mating system and ploidy level of truffles, both mycorrhizal and sterile fruit-body hyphae are the subject of conflicting hypotheses. The current dogma concerning Ascomycetes, supported by recent studies on truffles, maintains that the mycorrhizing mycelium is homokaryotic and that the short-lived ascogenous heterokaryotic hyphae resulting from the fertilization process occur only in truffle primordia. Therefore the gleba and sterile veins are also homokaryotic. Other studies show heterokaryons both in gleba and mantle hyphae of some truffle species, leading to the conclusion that longterm heterokaryons do exist in truffles. The matter is discussed.Some fundamental aspects concerning the life cycle of truffles (Pezizales) [1] have yet to be fully elucidated. Among these are the mating system and the ploidy level of both mycorrhizal and sterile fruit-body hyphae. Both are the subject of conflicting hypotheses.Tuber and Terfezia hyphal cells, like those of other Ascomycetes, are multinucleate (e.g. [2]). Ascertaining whether a mycelial culture is a homo or heterokaryon is, therefore, not straightforward. Nowadays, however, the prevailing perception, which is based on in-depth research, casts doubt on the long-term subsistence of natural vegetative heterokaryons in most filamentous Ascomycetes (e.g. [3]).The hypothesis that tends to be accepted today -a hypothesis that has been thoroughly investigated -maintains that the vegetative mycelium of such fungi is homokaryotic and that plasmogamy occurs only in the primordia of the fruit bodies. Plasmogamy in the developing fruit body leads to the formation of heterokaryotic ascogenous hyphae, from which, after karyogamy and meiosis, haploid ascospores develop (e.g. [2]). As a result, the heterokaryotic phase is brief and is restricted to the developing ascocarps.Yet, it had long been known that long-term heterokaryons exist in Neurospora crassa, Pezizomycotina [4]. This was later shown to be dependent on the existence of identical het alleles in the individual strains forming the heterokaryon [5]. Wild type Neurospora tetrasperma isolates are invariably heterokaryons, mostly selfing, but maintain some level of outcrossing in nature, as well as in the laboratory [6]. This phenomenon is also dependent on het allele identity in both nuclei forming the long-term heterokaryion (ibid). Thus conditions under which long term ascomyceteous heterokaryons may be maintained -do exist.No het genes were, so far, identified or demonstrated in truffles. But Terfezia boudieri and Kalaharituber pfeilii heterokaryon mycelial cultures originating from glebal outgrowth seem to be the rule rather than exception: In glebal K. pfeilii and T. boudieri cultures, the hyphal cells invariably *Address correspondence to this author at the Department of Life Sciences, Ben-Gurion University, P.O. Box 653, Beer Sheva 84105, Israel; Tel: + 972 8 6461338; Fax: +972 8 6472984; E-mail: zur@bgu.ac.il or kaganzur@gmail.com contained paired nuclei [7]. K. pfeilii hyphae originating from single as...