Further
increase in the acidity in the most denaturing acidic solution
is known to induce compaction of the fully unfolded protein into a
compact molten globule. The phenomenon of “acid-induced
folding of proteins” takes place at pH ∼1 in
strong acid aqueous solutions with high electrical conductivity and
surface tension, a condition that is difficult to handle using conventional
electrospray ionization methods for mass spectrometry. Here, high-pressure
electrospray ionization (HP-ESI) is used to produce well-resolved
mass spectra for proteins in strong acids with pH as low as 1. The
compaction of protein conformation is indicated by a large shift in
the charge state from high charges to native-like low charges. The
addition of salt to the protein in the most denaturing condition also
reproduces the compaction effect, thereby supporting the role of anions
in this phenomenon. Similar compaction of proteins is also observed
in organic solvent/acid mixtures. The charge state of the compacted
protein depends on the type of anions that formed ion pairs with a
positive charge on the protein. The dissociation of ion pairs during
the ionization process forms neutral acids that can be observed by
HP-ESI using a soft ion introduction configuration.