Purpose
The purpose of this study was to identify genetic variants on chromosome X associated with intraocular pressure (IOP) and determine if they possess any sex-specific effects.
Methods
Association analyses were performed across chromosome X using 102,407 participants from the UK Biobank. Replication and validation analyses were conducted in an additional 6599 participants from the EPIC-Norfolk cohort, and an independent 331,682 participants from the UK Biobank.
Results
We identified three loci associated with IOP at genomewide significance (
P
< 5 × 10
−8
), located within or near the following genes:
MXRA5
(rs2107482,
P
= 7.1 × 10
−11
),
GPM6B
(rs66819623,
P
= 6.9 × 10
−10
),
NDP
, and
EFHC2
(rs12558081,
P
= 4.9 × 10
−11
). Alleles associated with increased IOP were also associated with increased risk for primary open-angle glaucoma in an independent sample. Finally, our results indicate that chromosome X genetics most likely do not illicit sex-specific effects on IOP.
Conclusions
In this study, we report the results of genomewide levels of association of three loci on chromosome X with IOP, and provide a framework to include chromosome X in large-scale genomewide association analyses for complex phenotypes.