2024
DOI: 10.1101/2024.02.29.582794
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The Updated Mouse Universal Genotyping Array Bioinformatic Pipeline Improves Genetic QC in Laboratory Mice

Matthew W Blanchard,
John Sebastian Sigmon,
Jennifer Brennan
et al.

Abstract: The MiniMUGA genotyping array is a popular tool for genetic QC of laboratory mice and genotyping of samples from most types of experimental crosses involving laboratory strains, particularly for reduced complexity crosses. The content of the production version of the MiniMUGA array is fixed; however, there is the opportunity to improve array’s performance and the associated report’s usefulness by leveraging thousands of samples genotyped since the initial description of MiniMUGA in 2020. Here we report our eff… Show more

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