Transcriptome analysis of gills from the white shrimp Litopenaeus vannamei infected with White Spot Syndrome Virus

Clavero-Salas, Alejandra; Sotelo‐Mundo, Rogerio R.; Gollas‐Galván, Teresa; Hernández‐López, Jorge; Peregrino‐Uriarte, Alma B.; Muhlia‐Almazán, Adriana; Yépiz-Plascencia, Glória

doi:10.1016/j.fsi.2007.01.010

Cited by 107 publications

(49 citation statements)

References 44 publications

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“…Later, Rosa & Barraco (2008) suggested that the shrimp interferon-like protein (IntlP) is rather a region of the insect mitochondrial b subunit of the ATP-synthase, due to the high identity between both proteins (60-73%). Recently, Liang et al (2010) Transcriptomes and proteomes have provided a lot of information, not only about the characteristics of specific sequences of nucleotides or amino acids, but also about the proteins' structure and function in invertebrate organisms under diverse environmental conditions (Clavero-Salas et al, 2007). Moreover, novel proteins have been reported as accessories to the mitochondrial protein complexes in invertebrates species, such as the ticks Ornithodoros moubata and O. erraticus, where six novel proteins similar to the ATP synthase subunit 6 (atp6) were identified in the salivary glands.…”

Section: Complex V Atp Synthase (Ec 36314)mentioning

confidence: 99%

Invertebrates Mitochondrial Function and Energetic Challenges

Martínez‐Cruz¹,

Sánchez‐Paz²,

García‐Carreño³

et al. 2012

Bioenergetics

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Section: Complex V Atp Synthase (Ec 36314)mentioning

confidence: 99%

Invertebrates Mitochondrial Function and Energetic Challenges

Martínez‐Cruz¹,

Sánchez‐Paz²,

García‐Carreño³

et al. 2012

Bioenergetics

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“…Usually, the mRNA transcripts of selenoprotein possessing an antioxidant function are up-regulated after bacteria and virus infection. Litopenaeus vannamei SelM expression was transiently induced in gills after infection with the white spot syndrome virus (WSSV) on a time dependent manner (Clavero-Salas et al, 2007), the expression of selenoprotein glutathione peroxidase mRNA was significantly and could be induced by pathogen challenge (De Zoysa et al, 2008;Yeh et al, 2009;Liu et al, 2010). It was suggested that SelW was an antioxidant protein for lipid peroxidation (Jeong et al, 2002;Whanger, 2009).…”

Section: Danio Rerio (Np_840072)mentioning

confidence: 99%

Cloning and expression of selenoprotein W from pearl mussels Cristaria plicata

Liu

Wen

et al. 2014

Comparative Biochemistry and Physiology Part B: Biochemistry an

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“…Some notable genes that have been recently described from Expressed Sequence Tags (EST) databases are hemocyanin, ferritin, and fortilin-binding protein [1][2][3][4][5]. Many subtraction libraries have also been used to associate mined genes from EST to specific roles in immunity.…”

Section: Introductionmentioning

confidence: 99%

Subtracted Transcriptome Profile of Tiger Shrimp (Penaeus monodon) That Survived WSSV Challenge

Maralit

Ventolero

Maningas

et al. 2014

Dataset Papers in Science

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There is increased interest in the development of virus-resistant or improved shrimp stock because production is currently hindered by outbreaks and limited understanding of shrimp defense. Recent advancement now allows for high-throughput molecular studies on shrimp immunity. We used next-generation sequencing (NGS) coupled with suppression subtractive hybridization (SSH) to generate a transcriptome database of genes from tiger shrimp that survived White spot syndrome virus (WSSV) challenge. A total of 9,597 unique sequences were uploaded to NCBI Sequence Read Archive with accession number SRR577080. Sixty-five unique sequences, 6% of the total, were homologous to genes of Penaeus monodon. Genes that were initially related to bacterial infection and environmental stress such as 14-3-3 gene, heat shock protein 90, and calreticulin were also found including a few full-length gene sequences. Initial analysis of the expression of some genes was done. Hemocyanin, ferritin, and fortilin-binding protein exhibited differential expression between survivor and control tiger shrimps. Furthermore, candidate microsatellite markers for brood stock selection were mined and tested. Four trinucleotide and one dinucleotide microsatellites were successfully amplified. The study highlights the advantage of the NGS platform coupled with SSH in terms of gene discovery and marker generation.

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Transcriptome analysis of gills from the white shrimp Litopenaeus vannamei infected with White Spot Syndrome Virus

Cited by 107 publications

References 44 publications

Invertebrates Mitochondrial Function and Energetic Challenges

Invertebrates Mitochondrial Function and Energetic Challenges

Cloning and expression of selenoprotein W from pearl mussels Cristaria plicata

Subtracted Transcriptome Profile of Tiger Shrimp (Penaeus monodon) That Survived WSSV Challenge

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