The most common and effective way to control phoma stem canker (blackleg) caused by Leptosphaeria maculans in oilseed rape (Brassica napus) is through the breeding of resistant cultivars. Race specific major genes that mediate resistance from the seedling stage have been identified in B. napus or have been introgressed from related species. Many race specific major genes have been described and some of them are probably identical in B. napus (allotetraploid AACC) and the parental species B. rapa (diploid AA). More work is needed using a set of well-characterised isolates to determine the number of different major resistance genes available. In some B. napus cultivars, there is resistance which is polygenic (mediated by Quantitative Trait Loci) and postulated to be race non-specific. Many of these major genes and Quantitative Trait Loci for resistance to L. maculans have been located on B. napus genetic maps. Genes involved in race specific and polygenic resistance are generally distinct.

Blackleg disease, caused by the fungus Leptosphaeria maculans, is the major disease of canola (Brassica napus) worldwide. A set of 12 Australian L. maculans isolates was developed and used to characterise seedling resistance in 127 Australian cultivars and advanced breeding lines. Plant mortality data used to assess the effectiveness of seedling resistance in canola growing regions of Australia showed that Rlm3 and Rlm4 resistance genes were less effective than other seedling resistance genes. This finding was consistent with regional surveys of the pathogen, which showed the frequency of Rlm4-attacking isolates was >70% in fungal populations over a 10-year period. Differences in adult plant resistance were identified in a subset of Australian cultivars, indicating that some adult gene resistance is isolate-specific.

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Due to the large increase of canola production in Australia, current blackleg cultural control recommendations (extended rotation length and isolation distance from canola stubble) are not adhered to by farmers in many canola-producing regions. Canola crops are increasingly being sown in short rotation and, in many instances, adjacent to paddocks containing canola stubble. In this study, the level of disease in commercial canola crops was determined for different rotations and distances from canola stubble. There was a strong relationship between the presence of canola stubble from the previous year (6-month-old stubble) and distance to current canola crops, but no relationship between the presence of older (18–42 month old) stubble and distance to current canola crops. Blackleg severity was highest where canola crops had been sown adjacent to 6-month-old canola stubble, with the level of blackleg severity decreasing markedly in the first 100 m. Disease severity then generally declined up to 500 m. Plants 500–1000 m from 6-month-old stubble had similar levels of blackleg infection. Blackleg severity was similar between canola crops sown into 18-month-old canola stubble (short rotation) and crops sown into paddocks that had no history of canola for at least the previous 3 years (long rotation). Based on these findings, we recommend that canola crops should be sown at distances greater than 100 m and preferably 500 m from last season's canola stubble, rather than extending rotation length between crops.

Data from advanced breeding experiments between 1985 and 1994 were used to determine the effects of region, year and environment on the quality of canola grown across Victoria. Estimates from these unbalanced data were made using residual maximum likelihood. Environmental effects were large relative to cultivar effects for oil and protein content, while the reverse occurred for glucosinolate content. High oil contents (and low seed protein contents) were correlated with cooler spring temperatures and higher spring rainfall. Oil contents were lowest, on average, in canola grown in dry years, or from the hotter regions, such as the Mallee, and were highest in canola from the cooler, wetter regions, such as south-western and north-eastern Victoria. Fatty acid composition varied with year and region. Means for saturated fatty acid content averaged 6.4 0.1%. The oleic acid content averaged 60.3 0.4% and was higher in canola grown in central Victoria and the Wimmera, and in most years, in north-eastern Victoria compared with other regions. Low temperatures and low rainfall reduced oleic acid content. Linoleic acid content averaged 19.7 0.3% and linolenic acid averaged 10.4 0.3%, with the content of these fatty acids negatively correlated with the content of oleic acid. Erucic acid levels were below 0.6% in all regions.