2016
DOI: 10.18632/oncotarget.9710
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16S rRNA amplicon sequencing identifies microbiota associated with oral cancer, human papilloma virus infection and surgical treatment

Abstract: Systemic inflammatory events and localized disease, mediated by the microbiome, may be measured in saliva as head and neck squamous cell carcinoma (HNSCC) diagnostic and prognostic biomonitors. We used a 16S rRNA V3-V5 marker gene approach to compare the saliva microbiome in DNA isolated from Oropharyngeal (OPSCC), Oral Cavity Squamous Cell Carcinoma (OCSCC) patients and normal epithelium controls, to characterize the HNSCC saliva microbiota and examine their abundance before and after surgical resection.The a… Show more

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Cited by 252 publications
(290 citation statements)
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“…Leptotrichia species can cause opportunistic infections that lead to bacteremia in neutropenic patients with oral mucosal injuries [2,5] and bacteremia due to L. trevisanii after an allogeneic bone-marrow transplant [13]. Although systemic infections involving Leptotrichia species are infrequent, severe infections have been reported in immunocompromised patients [2,4,7,9,10,1319].
Figure 1.A phylogenetic tree obtained from the MEGA (www.megasoftware.net) program based on only sequences >800 bp by neighbor joining after ClustalW alignment.
…”
Section: Figurementioning
confidence: 99%
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“…Leptotrichia species can cause opportunistic infections that lead to bacteremia in neutropenic patients with oral mucosal injuries [2,5] and bacteremia due to L. trevisanii after an allogeneic bone-marrow transplant [13]. Although systemic infections involving Leptotrichia species are infrequent, severe infections have been reported in immunocompromised patients [2,4,7,9,10,1319].
Figure 1.A phylogenetic tree obtained from the MEGA (www.megasoftware.net) program based on only sequences >800 bp by neighbor joining after ClustalW alignment.
…”
Section: Figurementioning
confidence: 99%
“…They were also detected in patient material from tongue plaque with malodor [42], biofilms of caries, oral epithelial cells [48,49], vaginal swabs with high-risk human papillomavirus, and from HIV-positive and -negative subjects [55]. The guts of herbivorous, carnivorous, and omnivorous fish [58], tumor tissues and saliva of patients with head and neck squamous-cell carcinoma human papillomavirus (HPV), oropharyngeal squamous-cell carcinoma HPV, and oral cavity squamous-cell carcinoma HPV [19] all contained Leptotrichia species. They were also isolated from the bile aspirate of fish with cholelithiasis (gallstone diseases) and Opisthorchis felineus (fish-borne liver fluke infections), in pancreatitis and hepatitis C [61], and in saliva from a Behçet’s disease patient [64].…”
Section: Brief Additional Clinical Information On Leptotrichia Speciesmentioning
confidence: 99%
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“…They are of great value for the investigation of the oral microbiota, which include many microorganism species, some of which are very difficult to culture (Wade 2013). Sequencing of the 16S rRNA gene has shown differences in oral microbiota diversity and composition between patients suffering from oral cavity squamous cell carcinoma and healthy controls (Guerrero-Preston et al 2016). Similarly, the presence of the pathogens Porphyromonas gingivalis and Aggregatibacter actinomycetemcomitans in the oral microbiota was associated with an elevated risk of pancreatic cancer (Fan et al 2016).…”
Section: Oral Microbiota Investigations Using Next-generation Sequencingmentioning
confidence: 99%
“…Several studies based on the pyrosequencing analysis of 16S rRNA genes from the bacterial communities of cancer patients and healthy subjects showed significant differences in their microbiota profiles (Gong et al 2013;Guerrero-Preston et al 2016;Hu et al 2016). The levels of the Streptococcus, Fusobacterium, Abiotrophia, Haemophilus, Prevotella, Tannerella, Aggregatibacter, Leptotrichia, and Neisseria genera have been shown to vary between patients suffering from oral cancers and healthy controls (Gong et al 2013;Guerrero-Preston et al 2016;Hu et al 2016). However, the results between studies are often contradictory, highlighting the need to improve knowledge about the causal relationship between tumor development and oral microbiota.…”
Section: Cancer and Oral Virusesmentioning
confidence: 99%