2012
DOI: 10.1107/s1600536812012548
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41-Azido-41-deoxyrapamycin

Abstract: The title compound, C51H78N4O12, is a derivative of rapamycin, a triene macrolide anti­biotic mol­ecule isolated from Streptomyces hygroscopicus. The macrocyclic ring structure has 15 chiral centres, with one of the substituent hy­droxy groups giving an intra­molecular hydrogen bond to a ketone O-atom acceptor. The mol­ecules also form inter­molecular hy­droxy–ketone O—H⋯O hydrogen-bonding associations, giving one-dimensional chains extending along (010). The crystal has 108 Å3 solvent-accessible voids.

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Cited by 2 publications
(3 citation statements)
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“…Despite two years of efforts, we had never been able to obtain single crystals of these quaternary ammonium salt derivatives, so we tried to simulate the 3D structure of typical compounds 1 and 7 . Given the structure of rapamycin was extremely complicated, we attempted to construct this 3D structure based on the X-ray single crystal data of rapamycin reported by Swindel [16,17,18].…”
Section: Resultsmentioning
confidence: 99%
“…Despite two years of efforts, we had never been able to obtain single crystals of these quaternary ammonium salt derivatives, so we tried to simulate the 3D structure of typical compounds 1 and 7 . Given the structure of rapamycin was extremely complicated, we attempted to construct this 3D structure based on the X-ray single crystal data of rapamycin reported by Swindel [16,17,18].…”
Section: Resultsmentioning
confidence: 99%
“…27) Thus, the azido compound (2) was synthesized from rapamycin (1) via triflate activation of the C- 43 hydroxyl group followed by treatment with sodium azide according to our reported procedure. 28) Meanwhile, it should be pointed out that this method involves an S N 2 process and therefore gives rise to inversion of configuration at C-43. As already observed in our previous work, 28) the stereochemistry of compound (2) had been determined by single crystal X-ray diffraction studies.…”
Section: Resultsmentioning
confidence: 99%
“…28) Meanwhile, it should be pointed out that this method involves an S N 2 process and therefore gives rise to inversion of configuration at C-43. As already observed in our previous work, 28) the stereochemistry of compound (2) had been determined by single crystal X-ray diffraction studies. Next, the azido compound (2) was transformed to C43-aminorapamycin (3) via Staudinger reduction, which subsequently reacted with side chains (12) to afford targeted compounds (4a-e, 5a-c) as white powder.…”
Section: Resultsmentioning
confidence: 99%