Phospholipase B has not yet been well defined. The most important points about this enzyme are its relationships with lysophospholipase and phospholipase Al. As reported [Saito, K., Sugatani, J. & Okumura, T. (1991) Mc>thod,s Enzymol. 197, 446 -4561, Penicillium notutum phospholipase B is a glycoprotein with a molecular mass of 95 kDa and intrinsic lysophospholipase and phospholipase B activities; however, by endogenous proteolytic modification, its phospholipase B activity is lost almost completely, whereas its lysophospholipase activity remains unchanged.A cDNA library of P. notaturn was screened by hybridization with two synthetic oligodeoxyribonucleotide probes, which corresponds to two different pentapeptides of the enzyme. A hybridization-positive clone, pPLBl8, was isolated and its nucleotide sequence was determined. The deduced amino acid sequence was quite different from that found previously. Therefore, we rescreened the cDNA hbrdry with a Suu3AI fragment derived from pPLB18 and isolated a new clone, pPLB15. Comparison of the nucleotide sequences of pPLB15 and pPLB18 revealed that pPLB18 contained an insertion sequence of 53 bp. Consequently, the reading frame was open downstream for 603 amino acid residues.From the assigned sequence, it was deduced that the limited proteolysis occurred between Leu175 and Asp176; eight cysteine residues and 16 potential N-glycosylation sites were also found. No amino acid sequence similarity was found with other proteins, including other phospholipases.Phospholipase B has been found in microorganisms, plants and animal tissues; in many cases it has lysophospholipase activity in addition to phospholipase B activity, as reviewed by van Penicilliurn notutum phospholipase B is a glycoprotein with a molecular mass of about 95 kDa and intrinsic phospholipase B and lysophospholipase activities. However, on proteolytic modification with an endogenous protease(s), phospholipase B activity was almost completely lost, whereas lysophospholipase activity was unaffected [5].In this paper, we describe the isolation of a cDNA for the phospholipase B from P. notaturn and assign the primary structure of the protein moiety of this enzyme. The primary structure is discussed in relation to the enzymatic properties reported before [5, 61, and also to lysophospholipase and phospholipase A l .