Bile acids (BAs)
are biomolecules synthesized in the liver from
cholesterol and are constituents of bile. The in-vivo BA pool includes more than 50 known diverse BAs which are unconjugated,
amino acid conjugated, sulfated, and glucuronidated metabolites. Hemostasis
of bile acids is known to be highly regulated and an interplay between
liver metabolism, gut microbiome function, intestinal absorption,
and enterohepatic recirculation. Interruption of BA homeostasis has
been attributed to several metabolic diseases and drug induced liver
injury (DILI), and their use as potential biomarkers is increasingly
becoming important. Speciated quantitative and comprehensive profiling
of BAs in various biomatrices from humans and preclinical animal species
are important to understand their significance and biological function.
Consequently, a versatile one single bioanalytical method for BAs
is required to accommodate quantitation in a broad range of biomatrices
from human and preclinical animal species. Here we report a versatile,
comprehensive, and high throughput liquid chromatography-high resolution
mass spectrometry (LC-HRMS) targeted metabolomics method for quantitative
analysis of 50 different BAs in multiple matrices including human
serum, plasma, and urine and plasma and urine of preclinical animal
species (rat, rabbit, dog, and monkey). The method has been sufficiently
qualified for accuracy, precision, robustness, and ruggedness and
addresses the issue of nonspecific binding of bile acids to plastic
for urine samples. Application of this method includes comparison
for BA analysis between matched plasma and serum samples, human and
animal species differences in BA pools, data analysis, and visualization
of complex BA data using BA indices or ratios to understand BA biology,
metabolism, and transport.