Abbreviations: AGPs, antibiotic growth promoters; GALT, gut associated lymphoid tissues; DNA, deoxyribonucleic acid; E. coli, escherichia coli
IntroductionThe issue of gut health in relation to gut bacterial became more evident with the ban of antibiotic growth promoters (AGPs) in animal/poultry nutrition. This ban became preeminent with the development of resistant bacteria strain getting into the food chain. This will ultimately result in bacteria related health issues for consumers of poultry product. In the poultry industry, gut health is not just an interaction between gut bacteria; nutrients provided by the diet (nutrition) and the gut itself as a digestive organ but also as an organ that provides adequate protection against pathogenic bacteria. Gut associated lymphoid tissues (GALT) provides protection against pathogens encountered by the gut in chicken.1 It is responsible for inducing immune response against bacteria, viral, and parasitic enteric (i.e. introduced via the digestive tract) antigens 2-4 as well as responses to innocuous antigens.
5All this said: how do the bacterial populations that of a "MUST" must attach to the intestinal wall respond to certain feed additives used as suitable/probable alternatives to AGPs? It is a known fact that gut health has a principal role in determining overall health and performance of poultry birds. Immune response based studies will indicate the bird response. However bacteria response studies do consider the principles or mode of action of these alternatives with regards to bacteria population in the gut. Also considered is bird performance in terms of weight gain, feed conversion ratio/feed: gain ratio and coefficient of nutrient digestibility. Nutrient digestibility is with reference to the specific nutrient in question which is most likely affected. Modes of action of these alternatives differ, results from different studies utilizing them may also differ but, the core issue of bird performance being improved is of utmost importance to the farmer. Be as it may, bacteria population are more often determined using basic culturing and biochemical method of plating specific bacteria for stipulated number of days.Although there are suitable alternatives to AGPs (Enzymes, Probiotics, Prebiotics, Acidifiers, Synbiotic products etc), however how their effect on the biodiversity of gut bacteria may be an issue of consideration. Due to lack of knowledge of appropriate culturing conditions, large number of bacteria may remain unidentified using basic culturing and biochemical techniques have resulted in the misclassification of some of these bacteria.6 Given the profound impact of gut bacteria on performance, identification of bacteria assemblages in the gut at random will be of high biological and economic importance.7-10 Considering the limitation of standard culturing methods, a study was carried out aiming to identify bacteria biodiversity amplified from the gut of broiler birds through molecular techniques using 165 bacteria DNA sequencing. In using the 165 DNA se...