On the basis of integrating each subsystem in topological structure, implementation function, operation mode and institutional mechanism, this paper has established a comprehensive service system which could manage various heterogeneous resources and handle kinds of complex missions within the architecture to carry out the research of the resource scheduling architecture for service-oriented space-based information system. Originally, this paper analyzes the characteristics of space-based information system from two aspects of diversity and dynamics. Based on the research, this paper studies the organizational structure of resource scheduling of space-based information system to realize the unified management and scheduling of service-oriented diversification resources following the sequence from resources to missions. Afterwards, this paper has proposed a resource scheduling mode for the service-oriented space-based information system to realize the mapping from resources to missions, and it also has used that mode to block differentiated user requirements and the dynamic changes of the system. In the end, the paper has put forward the implementation plan of the resource scheduling for service-oriented space-based information system, and it also provides a reference for the next construction of the space-based information system.