“…Other prime TF candidates include TFs previously implicated in Tmem regulation such as RUNX3, E2F2, LEF1, BCL6, or members of the ELF-, KLF-, or FOXJ-families, as well as CREB1, ETS-1, and JUN-FOS, which are known to be involved in multiple cellular processes of differentiation and activation. Additional interesting candidates include (1) the aryl hydrocarbon receptor, AHR, which has been implicated in differentiation of CD4 + T cells into pro-or anti-inflammatory subsets and, hence, to modulate autoimmune diseases in various animal models (reviewed in Esser et al, 2009;Hanieh, 2014) and (2) the ets-family member FLI-1, which has been reported to affect thymic T cell development, TCR signaling, glycosphingolipid metabolism, and cytokine expression and has been implicated in autoimmune diseases, too (Richard et al, 2013;Sato et al, 2014). Others of the top-predicted TFs have not been directly associated to regulation of Tmem differentiation yet, but are players in potentially relevant cellular processes, such as intracellular signaling (RFX3, via the RAS-MAPK pathway), metabolic processes (NRF1 and SREBF1, associated with mTORC1 signaling), and chromatin remodeling (ZFP161, targeting of the repressive Polycomp complex).…”