The global minimum structures of the carbon‐doped Ben (n = 1–12) clusters are obtained at the B3PW91/6‐311+G(d) level and compared with those of pure beryllium clusters. It is found that the carbon dopant prefers to be located outside the host Ben cage and tends to be tetracoordinated. The evolution of the electronic and energetic properties of BenC is studied using the QCISD(T) method. Results show that the introduction of carbon doping strengthens intracluster interaction of beryllium clusters. Besides, the Be3C and Be8C clusters, with their particular stability, are considered as magic‐number clusters in the BenC series. Molecular‐orbital (MO) analysis indicates that both clusters have fully filled electron shells, whereas the contribution of the carbon atomic orbital leads to MO energy‐level disorder of the BenC clusters.