2003
DOI: 10.1016/s1074-5521(02)00305-8
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A Fluorogenic Histone Deacetylase Assay Well Suited for High-Throughput Activity Screening

Abstract: Histone deacetylases (HDACs) are important enzymes for the transcriptional regulation of gene expression in eukaryotic cells. Recent findings suggest that HDACs could be key targets for chemotherapeutic intervention in malignant diseases. A convenient and sensitive fluorogenic assay for HDAC activity would therefore expedite studies of HDAC in transcriptional regulation and in vitro screening for drug discovery. In this study, novel fluorogenic substrates of HDACs were synthesized with an epsilon-acetylated ly… Show more

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Cited by 266 publications
(249 citation statements)
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“…The Fluor de Lys assay is a relatively new biochemical method for measuring deacetylation of a chemically modified acetylated peptide substrate coupled to aminomethylcoumarin. Upon deacetylation, the aminomethylcoumarin group is proteolytically cleaved resulting in fluorescence (45).…”
Section: Resultsmentioning
confidence: 99%
“…The Fluor de Lys assay is a relatively new biochemical method for measuring deacetylation of a chemically modified acetylated peptide substrate coupled to aminomethylcoumarin. Upon deacetylation, the aminomethylcoumarin group is proteolytically cleaved resulting in fluorescence (45).…”
Section: Resultsmentioning
confidence: 99%
“…Typical fluorogenic substrates for class I HDACs consist of an eacetylated lysine residue (alone or in a short peptide) coupled through a carboxy-terminal amide to a fluorescent moiety such as 7-amino-4-methylcoumarin (AMC), for example, cell-permeable Boc-Lys(Ac)-AMC 29,30 . These synthetic substrates undergo a two-step conversion.…”
Section: Increasedmentioning
confidence: 99%
“…Second, proteases cleave the Lys-AMC amide bond to release the AMC, which fluoresces. In tissue culture-based assays, the second step is performed after cell lysis by addition of excessive amount of trypsin, which only recognizes deacetylated lysine 29,30 . As the deacetylated Boc-Lys-AMC was the identical substrate used in our CTSL assay, we postulated that the substrate Boc-Lys(Ac)-AMC could also be processed in live cells through the two-step conversion by endogenous HDAC and CTSL activities.…”
Section: Increasedmentioning
confidence: 99%
“…The fluorescence analysis method was used for HDAC enzyme activity assay in vivo which was well suited for high-throughput screening of HDAC inhibitors. 31 HDAC releases the acetate moiety from 3-acetylated lysine residues of the substrate peptides, then the deacetylated peptides containing now unprotected lysine residues are recognized by trypsin and subsequently cleaved to release 7-amino-4-methylcoumarin (AMC). The fluorescence measurement is done at excitation of 390 nm, emission of 460 nm by fluorometry (Varioskan, Thermo).…”
Section: Methodsmentioning
confidence: 99%