2021
DOI: 10.1101/2021.06.18.448962
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A gate and clamp regulate sequential DNA strand cleavage by CRISPR-Cas12a

Abstract: CRISPR-Cas12a has been widely used for genome editing and diagnostic applications, yet it is not fully understood how RNA-guided DNA recognition activates the sequential cleavage of the non-target strand (NTS) followed by the target strand (TS). Here we used singlemolecule magnetic tweezers microscopy, ensemble gel-based assays and nanopore sequencing to explore the coupling of DNA unwinding and cleavage. In addition to dynamic R-loop formation, we also directly observed transient dsDNA unwinding downstream of… Show more

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Cited by 2 publications
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“…Possibly, this not only inactivates the invader DNA but may generally slow down transcription and/or replication of the foreign DNA. Notably, a post-cleavage stabilization of the R-loop and the trapping of supercoiling has recently been observed for the Type V-A CRISPR–Cas effector complex Cas12a ( 48 ). Contrarily, a Cas9 variant from Staphylococcus aureus has been observed to be a multiple turnover enzyme indicating that diverse strategies may be used to impede foreign DNA invasion by regulating the post-cleavage behavior of the effector complexes ( 49 ).…”
Section: Discussionmentioning
confidence: 99%
“…Possibly, this not only inactivates the invader DNA but may generally slow down transcription and/or replication of the foreign DNA. Notably, a post-cleavage stabilization of the R-loop and the trapping of supercoiling has recently been observed for the Type V-A CRISPR–Cas effector complex Cas12a ( 48 ). Contrarily, a Cas9 variant from Staphylococcus aureus has been observed to be a multiple turnover enzyme indicating that diverse strategies may be used to impede foreign DNA invasion by regulating the post-cleavage behavior of the effector complexes ( 49 ).…”
Section: Discussionmentioning
confidence: 99%