A loop-mediated isothermal amplification assay for rapid and sensitive detection of bovine papular stomatitis virus

Kurosaki, Yohei; Okada, Sayaka; Nakamae, Sayuri; Yasuda, Jiro

doi:10.1016/j.jviromet.2016.07.031

Cited by 4 publications

(2 citation statements)

References 28 publications

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“…It is noteworthy that for the implementation of all these distinct research approaches, varied types of biological samples were collected and analyzed from a range of livestock, poultry, and fish. The most frequently used biological samples for LAMP assays have been obtained from blood, feathers, fecal matter, liver, lung, mucus, kidney, muscle, saliva, semen, serum, skin, spleen, and urine (ALHASSAN et al, 2007;DAS et al, 2012;PAWAR et al, 2015;INOSHIMA et al, 2016;KUROSAKI et al, 2016;SUWANCHAROEN et al, 2016; HOWSON et al, 2017;LJUNGSTRÖM et al,2018;OYHENART, 2018;. As mentioned earlier in this article, the applications of LAMP assay are most diverse because the versatility of the method itself.…”

Section: When Dealing Individually Withmentioning

confidence: 99%

Suitability of scienciometric analysis targeting Loop Mediated Isothermal Amplification Assay applied to farm animals / Adequação da análise cienciométrica direcionada ao ensaio de Amplificação Isotérmica Mediada por Alça aplicada à animais de produção

Ribeiro¹,

Campos²,

Sousa³

et al. 2021

BJDV

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The objective of the study was to carry out, with the aid of Scopus®️, a scientometric analysis of Loop Mediated Isothermal Amplification Assay (LAMP) applied to farm animals. The research has considered articles from January 2000 to December 2019 and only open or closed access articles published in English. The bibliometric matrices were run through RStudio, applying Biblioshiny as a web interface to Bibliometrix resources for R environment. Later, several bibliometric data were collected with the aid of Bibliometrix, most of which were converted into graphs using Microsoft Excel®️. The scientometric analysis base of the current study was composed by 438 articles from 504 researched in the Scopus®️. Of the 438 articles analyzed, it stands out as results: 1) the years of 2015 (11,4%) and 2019 (11,4%) had equally the highest number of publications in the area; 2) Journal of Virological Methods (12,5%) ranked first in the ranking of journals according to total articles published; 3) China (49,8%), Japan (12,7%) and India (7,1%) have been countries of more published articles; 4) most articles applied the assay to detect microorganisms affecting the farm animals; and, 5) together, the animal groups fish, bovine, poultry, and swine corresponded to 2/3 (71,1%) of the animals used in scientific research using the LAMP method. With all these results, it is concluded that the scientometric analysis showed an overview of the information in the articles about LAMP applied to farm animals.

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Section: When Dealing Individually Withmentioning

confidence: 99%

Suitability of scienciometric analysis targeting Loop Mediated Isothermal Amplification Assay applied to farm animals / Adequação da análise cienciométrica direcionada ao ensaio de Amplificação Isotérmica Mediada por Alça aplicada à animais de produção

Ribeiro¹,

Campos²,

Sousa³

et al. 2021

BJDV

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“…LAMP uses four to six primers, which increases the efficiency of target genome amplification [15]. We developed rapid and sensitive LAMP assays for the detection of SARS-CoV-2, ebolaviruses, Marburgvirus, Zika virus, Lassa virus, foot and mouth disease, and bovine papular stomatitis virus [16][17][18][19][20][21][22][23][24][25][26]. Additionally, the LAMP assay is a simple technique with battery-powered equipment which does not require other advanced equipment and can be made available in mobile clinics, as well as remote areas [18,19,27].…”

Section: Introductionmentioning

confidence: 99%

Development of Quantitative Real-Time PCR and Loop-Mediated Isothermal Amplification Assays for the Surveillance and Diagnosis of Herpes B Virus Infection

Amano,

Sapkanarak,

Thbthimthong

et al. 2023

Viruses

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Herpes B virus (BV) is a zoonotic virus which can be transmitted from macaques to humans, which is often associated with high mortality rates. Because macaques often exhibit asymptomatic infections, individuals who come into contact with these animals face unexpected risks of BV infections. A serological test is widely performed to investigate BV infections. However, the assay’s sensitivity and specificity appeared to be inadequate, and it does not necessarily indicate ongoing viral shedding. Here, we developed LAMP and qPCR assays aiming to detect BVs with a high sensitivity and specificity in various macaque species and validated them using oral swab samples collected from 97 wild cynomolgus macaques living in Thailand. Our LAMP and qPCR assays detected more than 50 and 10 copies of the target sequences per reaction, respectively. The LAMP assay could detect BV within 25 min, indicating its advantages for the rapid detection of BV. Collectively, our findings indicated that both assays developed in this study exhibit advantages and usefulness for BV surveillance and the diagnosis of BV infections in macaques. Furthermore, for the first time, we determined the partial genome sequences of BVs detected in cynomolgus macaques in Thailand. Phylogenetic analysis revealed the species-specific evolution of BV within macaques.

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The first molecular characterization and phylogenetic analysis of bovine papular stomatitis virus in Iran

Akbari,

Ghorani,

Farhadi

et al. 2023

Comparative Immunology, Microbiology and Infectious Diseases

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A loop-mediated isothermal amplification assay for rapid and sensitive detection of bovine papular stomatitis virus

Cited by 4 publications

References 28 publications

Suitability of scienciometric analysis targeting Loop Mediated Isothermal Amplification Assay applied to farm animals / Adequação da análise cienciométrica direcionada ao ensaio de Amplificação Isotérmica Mediada por Alça aplicada à animais de produção

Suitability of scienciometric analysis targeting Loop Mediated Isothermal Amplification Assay applied to farm animals / Adequação da análise cienciométrica direcionada ao ensaio de Amplificação Isotérmica Mediada por Alça aplicada à animais de produção

Development of Quantitative Real-Time PCR and Loop-Mediated Isothermal Amplification Assays for the Surveillance and Diagnosis of Herpes B Virus Infection

The first molecular characterization and phylogenetic analysis of bovine papular stomatitis virus in Iran

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