Several unanswered questions in T cell immunobiology relating to intracellular processing or in vivo antigen presentation could be approached if convenient, specific, and sensitive reagents were available for detecting the peptide-major histocompatibility complex (MHC) class I or class II ligands recognized by ␣ T cell receptors. For this reason, we have developed a method using homogeneously loaded peptide-MHC class II complexes to generate and select specific mAb reactive with these structures using hen egg lysozyme (HEL) and I-A k as a model system. mAbs specific for either HEL-(46-61)-A k or HEL-(116-129)-A k have been isolated. They cross-react with a small subset of I-A k molecules loaded with self peptides but can nonetheless be used for f low cytometry, immunoprecipitation, Western blotting, and intracellular immunof luorescence to detect specific HEL peptide-MHC class II complexes formed by either peptide exposure or natural processing of native HEL. An example of the utility of these reagents is provided herein by using one of the anti-HEL-(46-61)-A k specific mAbs to visualize intracellular compartments where I-A k is loaded with HEL-derived peptides early after antigen administration. Other uses, especially for in vivo tracking of specific ligand-bearing antigen-presenting cells, are discussed.The majority of ␣ receptor-bearing T cells recognizes antigen as peptide-major histocompatibility complex (MHC) class I or class II complexes displayed on the surface of antigenpresenting cells (APCs), and the biochemistry of peptide-MHC molecule interaction, the cell biology of peptide generation from intact protein antigen, and the site(s) of intracellular association of these peptides with MHC molecules have been explored in great detail (for review, see refs. 1 and 2). Despite this progress in understanding antigen processing and presentation, it is still not known exactly where MHC class II molecules are loaded with particular peptides or whether all APCs process antigen in the same way or with the same efficiency. Past studies have necessarily relied on cells that can be obtained in large numbers for biochemical analysis. Rare APCs, such as dendritic cells, could have specialized antigenprocessing mechanisms not easily amenable to study by current techniques, and for many antigens and most cells, a kinetic and spatial analysis of the formation of class II complexes involving specific peptide has not been possible.In vivo antigen presentation is also incompletely understood. It is not clear which cells capture antigen and present it in immunogenic or tolerizing form to T cells after antigen introduction by various routes. Likewise, we are only beginning to understand the dynamics of antigen-specific immune cell A major limitation in studying these issues is the lack of reagents able to identify and quantitate T cell receptor (TCR) ligands on individual cells, to detect such complexes within intact cells, or to characterize cells bearing these ligands by methods such as flow cytometry or immunohis...