Coronavirus disease-2019 (COVID-19) is a respiratory disease in which Spike
protein from SARS-CoV-2 plays a key role in transferring virus genomic code into target
cells. Spike protein, which is found on the surface of the SARS-CoV-2 virus, latches onto
angiotensin-converting enzyme 2 receptors (ACE2r) on target cells. The RNA genome of
coronaviruses, with an average length of 29 kb, is the longest among all RNA viruses and
comprises six to ten open reading frames (ORFs) responsible for encoding replicase and
structural proteins for the virus. Each component of the viral genome is inserted into a helical
nucleocapsid surrounded by a lipid bilayer. The Spike protein is responsible for damage to
several organs and tissues, even leading to severe impairments and long-term disabilities.
Spike protein could also be the cause of the long-term post-infectious conditions known
as Long COVID-19, characterized by a group of unresponsive idiopathic severe neuro- and
cardiovascular disorders, including strokes, cardiopathies, neuralgias, fibromyalgia, and Guillaume-Barret's like-disease. In this paper, we suggest a pervasive mechanism whereby the
Spike proteins either from SARS-CoV-2 mRNA or mRNA vaccines, tend to enter the mature
cells, and progenitor, multipotent, and pluripotent stem cells (SCs), altering the genome integrity. This will eventually lead to the production of newly affected clones and mature cells. The
hypothesis presented in this paper proposes that the mRNA integration into DNA occurs
through several components of the evolutionarily genetic mechanism such as retrotransposons
and retrotransposition, LINE-1 or L1 (long interspersed element-1), and ORF-1 and 2 responsible for the generation of retrogenes. Once the integration phase is concluded, somatic cells, progenitor cells, and SCs employ different silencing mechanisms. DNA methylation, followed by
histone modification, begins to generate unlimited lines of affected cells and clones that form
affected tissues characterized by abnormal patterns that become targets of systemic immune
cells, generating uncontrolled inflammatory conditions, as observed in both Long COVID-19
syndrome and the mRNA vaccine.