A miniaturized threshold-triggered acceleration data-logger for recording burst movements of aquatic animals

Nishiumi, Nozomi; Matsuo, Ayane; Kawabe, Ryo; Payne, Nicholas L.; Huveneers, Charlie; Watanabe, Yuuki; Kawabata, Youhei

doi:10.1101/203828

Cited by 2 publications

(3 citation statements)

References 27 publications

(35 reference statements)

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“…However, the tail beat frequency is not a fixed value and it would change with the fish's stress. Consequently, data loggers with higher frequencies were developed whose sampling frequency can be regulated manually, achieving good performance in measuring burst movements (Nishiumi et al 2018).…”

Section: Accelerationmentioning

confidence: 99%

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A survey of fish behaviour quantification indexes and methods in aquaculture

Huang

Wei

2021

Reviews in Aquaculture

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Section: Accelerationmentioning

confidence: 99%

“…Consequently, data loggers with higher frequencies were developed whose sampling frequency can be regulated manually, achieving good performance in measuring burst movements (Nishiumi et al . 2018).…”

Section: Quantification Indexes and Algorithm Of Fish Behaviourmentioning

confidence: 99%

A survey of fish behaviour quantification indexes and methods in aquaculture

Huang

Wei

2021

Reviews in Aquaculture

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“…My approach assumes that tags log data continuously ) rather than in bursts, as some systems do (Nishiumi et al 2018, and I arbitrarily split the projected logging life into three groups (Fig. 1) based on the questions being asked in the study.…”

Section: Methodology Building Tags For Three Deployment Lengthsmentioning

confidence: 99%

Alpine ungulate movement: Quantification of spatiotemporal environmental energetics and social interaction

Redcliffe¹

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Species movement, an animal’s ability to change its location, is a fundamental property of life, and animals have diverse physical and behavioural attributes that are believed to enhance efficient travel and optimization of resources. Quantifying movement energetics and returns to examine these ideas over relevant time- and space scales is, however, problematic. In this thesis, I set out to develop and use advanced biologging tag technology to determine a second by second account of the behaviour and location of tagged animals to unveil where and when key behaviours are occurring, to answer key questions about feeding and social behaviour, allocation in space and the energetic costs associated with different movement decisions. Specifically, I used accelerometers, magnetometers, temperature and pressure sensors with GPS units in animal-attached loggers to examine key questions linking movement, energetics and feeding and aggressive behaviours in 3 wild- and 3 domestic ungulate species in mountainous landscapes in the French Alps, monitored for periods between 30 and 200 days. To obtain high-frequency data using electronic devices for long periods, I had to first design new housings to attach safely the loggers to the animals and develop methods for weather proofing the loggers. I designed, using CAD-designa and 3D printing, different housing types and used ‘Guronic’ resin to shockproof and waterproof circuit boards. This allowed me to obtain logging data for up to 200 days. To give a location per second but stay within ethical weight restrictions, the dead-reckoning method to reconstruct fine-scale movements between low resolution GPS fixes was adopted. To improve the accuracy of dead-reckoning estimates I improved the method using behavioural definition to identify real moves (steps, grazing, moving) and distinguish it from resting, grooming and other behaviours not leading to a displacement of the animal in space, allowing to selectively filter data to be dead-reckon. Using the data collected, I showed that central-place-based, but free-roaming, domestic goats exhibited efficient space-use by having time-dependent fanning out from their central place, which reduced local resource depletion. Models predicted that area-use increased logarithmically with herd size and duration. These finding could lead to improved livestock management in multi-functional alpine landscapes, to reduce the risk of over-grazing and manage interactions with other grazing species and clonflicts with other landuse needs. The goat grazing patterns were compared to those of wild ibex and revealed goats to be more adaptable, with the ibex being particularly vulnerable to changes in temperature, exacerbated by them preferring steep slopes with associated high metabolic costs and heat generation during ascent. These results could further inform management decisions regarding the survival of alpine ibex under projected climate change. Furthermore I developed new biologging approaches to investigate social interactions, specifically head-clashing in both species. This agonistic behaviour was associated with competition and the rut in ibex and was quantified using methods first developed for the domestic goat, where the behaviour appeared to relate primarily to competition for food. Using the goat as a surrogate species, the behaviour could be identified and mapped for the ibex, which highlighted areas and times important for head-clashing, including drastic increases during the rut. Finally, movement data and proxies for energy expenditure from three domestic species (sheep, cows and goats) and three wild species (ibex, mouflon and chamois) was utilised to produce species-specific energy landscapes across the terrains they used. This indicated that different anatomies and behaviours resulted in different, species-specific, movement costs for specific topographies and habitats. Energy use for travel across heterogeneous space depends, therefore, on the species concerned. These findings thus highlight the importance to consider that species with different life histories and ecological needs use landscapes in contrasting ways and my results can provide a more refined evidence base for the management and conservation of these species in alpine grasslands. These biologging approaches allow now also to address further management issues such as the responses to disturbances from tourists (hiking, skiers, etc.) and even reveal how species are more susceptible to climate change.

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A miniaturized threshold-triggered acceleration data-logger for recording burst movements of aquatic animals

Cited by 2 publications

References 27 publications

A survey of fish behaviour quantification indexes and methods in aquaculture

A survey of fish behaviour quantification indexes and methods in aquaculture

Alpine ungulate movement: Quantification of spatiotemporal environmental energetics and social interaction

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