A Molecular Dynamics Study Proposing the Existence of Structural Interaction Between Cancer Cell Receptor and RNA Aptamer

Mashatooki, Mohaddeseh Habibzadeh; Sardroodi, Jaber Jahanbin

doi:10.1007/s10904-020-01740-1

Cited by 3 publications

(1 citation statement)

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“…The performed protocol of simulation for all systems was containing “minimization, annealing, and a final 50 ns and 100 ns NPT (isothermal–isobaric) ensemble production simulation”. 77,78 During the NPT production simulation, temperature and pressure were considered to be fixed using a Langevin thermostat 79 and barostat. 80 In the NPT production run, the Langevin piston target was set to 1 atm.…”

Section: Computational Detailsmentioning

confidence: 99%

Improved delivery and competitive adsorption of paclitaxel and mitomycin C anticancer drugs on boron nitride nanoparticles: a molecular dynamics insight

Mashatooki

Ghalami‐Choobar

2022

Phys. Chem. Chem. Phys.

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Section: Computational Detailsmentioning

confidence: 99%

Improved delivery and competitive adsorption of paclitaxel and mitomycin C anticancer drugs on boron nitride nanoparticles: a molecular dynamics insight

Mashatooki

Ghalami‐Choobar

2022

Phys. Chem. Chem. Phys.

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Anticancer nanomedicines harnessing tumor microenvironmental components

Chen

et al. 2022

Expert Opinion on Drug Delivery

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Advances in aptamer screening and aptasensors’ detection of heavy metal ions

et al. 2021

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Heavy metal pollution has become more and more serious with industrial development and resource exploitation. Because heavy metal ions are difficult to be biodegraded, they accumulate in the human body and cause serious threat to human health. However, the conventional methods to detect heavy metal ions are more strictly to the requirements by detection equipment, sample pretreatment, experimental environment, etc. Aptasensor has the advantages of strong specificity, high sensitivity and simple preparation to detect small molecules, which provides a new direction platform in the detection of heavy metal ions. This paper reviews the selection of aptamers as target for heavy metal ions since the 21th century and aptasensors application for detection of heavy metal ions that were reported in the past five years. Firstly, the selection methods for aptamers with high specificity and high affinity are introduced. Construction methods and research progress on sensor based aptamers as recognition element are also introduced systematically. Finally, the challenges and future opportunities of aptasensors in detecting heavy metal ions are discussed.

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A Molecular Dynamics Study Proposing the Existence of Structural Interaction Between Cancer Cell Receptor and RNA Aptamer

Cited by 3 publications

References 61 publications

Improved delivery and competitive adsorption of paclitaxel and mitomycin C anticancer drugs on boron nitride nanoparticles: a molecular dynamics insight

Improved delivery and competitive adsorption of paclitaxel and mitomycin C anticancer drugs on boron nitride nanoparticles: a molecular dynamics insight

Anticancer nanomedicines harnessing tumor microenvironmental components

Advances in aptamer screening and aptasensors’ detection of heavy metal ions

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