Tick‐borne anaplasmosis and ehrlichiosis are clinically important emerging zoonoses usually overlooked by veterinarians and physicians alike. This study aimed at detecting and genetically characterizing
Ehrlichia
and
Anaplasma
species in ixodid ticks and their animal hosts from the West Bank, Palestine. A total of 723 ixodid ticks belonging to three genera (
Rhipicephalus, Hyalomma, Haemaphysalis
) were collected from dogs, sheep, goats and camels. In addition, 189 blood samples were collected from dogs, sheep, camels, horses and a goat from the West Bank, Palestine. All tick and blood samples were investigated for the presence of
Anaplasma
and
Ehrlichia
targeting a 345 bp fragment of the 16S
rRNA
gene followed by sequence analysis. The infection rate of
Anaplasma
spp. in ticks was 6.5% (47/723).
Anaplasma platys
was identified in 28% (13/47) of them. Whereas, based on a partial sequence (851 bp) of
msp4
gene, 38% (18/47) were identified as
A. ovis
. The species of the remaining 16 positive samples (16/47, 34%) could not be identified. Simultaneously, the infection rate of
Ehrlichia
spp. in the ticks was 0.6% (4/723). Three of which were
E. canis
and one was
Ehrlichia
spp. The infection rate of
A. platys
in dogs’ blood samples was 10% (13/135), while it was 1.5% (2/135) for
E. canis
. The infection rate of
Anaplasma
in sheep blood samples was 40% (19/47), out of which 26% (5/19) were caused by
A. ovis
as revealed by
msp4
‐
PCR
. Implementation of purely‐spatial analysis by sa
TS
can for all cases of
Anaplasma
revealed two statistically significant clusters in two districts; Tubas town and Majdal‐Bani‐Fadil village on the western hills of the Jordan Valley. Most cases of
Anaplasma
(83%) were from rural areas where life cycle components (vector, host and reservoir) abundantly interact. This study is the first in Palestine to reveal the presence of
Anaplasma
and
Ehrlichia
in ticks, dogs and sheep providing crucial platform for future epidemiological surveys and control strategies in the country and region.