Simple sequence repeats (SSRs), also known as microsatellites, are short tandem repeat sequences with a motif length of 1-6 bp characterized by high variability and codominant inheritance and have been widely used in species identification, genetic diversity studies, and phylogenetic relationship determination (Chmielewski et al., 2015;Dashnow et al., 2015). SSRs are caused by slipped strand mispairing and subsequent errors during DNA replication, repair, and recombination (Levinson & Gutman, 1987). SSRs are mainly found in intergenic and noncoding regions, with a few present in introns (Li et al., 2004;Liu et al., 2021;Su et al., 2018). Previous studies have shown that the characteristics of genomic SSRs in different taxa (such as their distribution patterns) reflect their phylogenetic relationships (Manee et al., 2020;Srivastava et al., 2019).The distribution of SSRs in some chloroplast (cp) genomes is nonrandom and dominated by mononucleotides, where A/T bases account for the majority (Ellegren, 2004;George et al., 2015;