The lattice density functional theory (LDFT) is used to describe the substrate effect on the phase behavior of polymer brush grafted on different substrates. The LDFT predicts that: both attractive and repulsive interactions between the substrate and the polymer chains have effects on the thickness of brushes; when the short‐range monomer–substrate interaction is larger than a certain value, the thickness and density profiles of polymer brushes almost do not change. And also an attractive substrate can increase the critical grafting density of pancake to brush transition. For temperature responsive polymer brushes, the temperature transition points are almost the same with different substrates, however, an attractive substrate can increase the swelling ratio and a repulsive substrate can decrease the swelling ratio. We also find that an increasing grafting density can decrease the substrate effect on the swelling behavior of temperature responsive polymer brushes.