Background:The mechanism of cataract formation by the recently discovered ␥D-crystallin W42R mutant is unknown. Results: Structural, biochemical, and biophysical studies revealed a partially unfolded species of the W42R mutant. Conclusion: Partially unfolded species serve as nuclei for aggregation. Significance: The properties of the W42R mutant ␥D-crystallin provide the link to the pathogenesis of age-related cataract caused by photodamaged wild-type ␥D-crystallin.