2017
DOI: 10.1007/s00894-017-3378-9
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A novel method for constructing continuous intrinsic surfaces of nanoparticles

Abstract: In recent years, the field of nanotechnology has become increasingly prevalent in the disciplines of science and engineering due to it’s abundance of application areas. Therefore, the ability to study and characterize these materials is more relevant than ever. Despite the wealth of simulation and modeling studies of nanoparticles reported in the literature, a rigorous description of the interface of such materials is rarely included in analyses which are pivotal to understanding interfacial behavior. We propo… Show more

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Cited by 12 publications
(21 citation statements)
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“…The TIP3P water model 57 , modified for the CHARMM forcefield 58 , was used to describe interactions involving water. This combination of forcefields has previously been shown to give a good description of SDS micelles and DS − monolayers 1,26,59,60 .…”
Section: Simulation Protocolmentioning
confidence: 93%
“…The TIP3P water model 57 , modified for the CHARMM forcefield 58 , was used to describe interactions involving water. This combination of forcefields has previously been shown to give a good description of SDS micelles and DS − monolayers 1,26,59,60 .…”
Section: Simulation Protocolmentioning
confidence: 93%
“…Except for the morphological changes, the internal status of the Palm‐CR3 nanostructures would also be affected by the force switch‐offs. Molecular scale simulations provide a straightforward approach for us to understand the fiber structures and self‐assembly process . In this work, molecular dynamics simulations using coarse‐grained Martini force field in Gromacs were performed to study the self‐assembly details of Palm‐CR3 under different conditions.…”
Section: Resultsmentioning
confidence: 99%
“…In order to faithfully describe the confined water at the interface with the monolayers, We chose to develop this bespoke intrinsic surface method, rather than using a method employing specific surfactant headgroup atoms as anchor points 53 or a probe-based method 54 , since it allows us to naturally partition the intrinsic surface into the monolayer-water and air-water interfaces. Viewing either monolayer from the middle of the confined layer, the z-position of the monolayer-water intrinsic surface is defined for each grid box as the CTAB atom found protruding furthest into the confined water layer in that given grid box.…”
Section: Analysis Methodsmentioning
confidence: 99%