Geothermal resources have significant development and usage potential. It is critical to conduct geological investigation of geothermal resources prior to mining, so as to deepen our knowledge and comprehension of geothermal resources. Ground water is heated by magmatic rocks and geothermal resources can be created in magmatic rock areas. However, their communication is weak, and the depth of burial is typically great. It is difficult for traditional geophysical methods, such as induced polarization method, to achieve useful exploration depths, and they have low accuracy. In this article, a comprehensive geophysical method, based on the controlled source audio-frequency magnetotelluric method (CSAMT) and transient electromagnetic method (TEM), is applied to geothermal exploration in a magmatic rock area. This method compensates for the shortcomings of a single method and achieves a good exploration effect, thereby providing a reliable geological foundation for further development and utilization of geothermal resources.