A Pan-Cancer Analysis of the Oncogenic Role of YKT6 in Human Tumors

Zhang, Xuezhong; Dapar, Mark Lloyd Granaderos; Chen, Yingjun; Liu, Tonggang

doi:10.21203/rs.3.rs-2246905/v1

Cited by 1 publication

(1 citation statement)

References 21 publications

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“…[5] The pan-cancer analysis is based on existing public data and previous research findings. [52] If there is missing data or incomplete information for certain cancer types, it may affect the comprehensiveness of the analysis. The reliability of the analysis results depends on the quality of the original data.…”

Section: Discussionmentioning

confidence: 99%

A pan-cancer analysis of TNFAIP8L1 in human tumors

Sun,

Zhang,

Zhu

et al. 2023

Medicine

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TNFAIP8L1, as a recently identified member in TNFAIP8 family, plays an important role in tumorigenesis. However, a pan-cancer analysis of TNFAIP8L1 in human tumors has not been conducted until now. The main purpose of study is to investigate TNFAIP8L1 during 33 different types of human tumors by using TCGA and GTEx. The pan-cancer analysis showed that TNFAIP8L1 was significantly over-expressed in 15 cancers and low-expressed in 9 cancers. There were distinct relations between TNFAIP8L1 expression and prognosis of patients with cancer. Furthermore, we also found that DNA methylation and RNA modification of TNFAIP8L1 were associated with many cancers. And then, we detected that TNFAIP8L1 level was positively associated with cancer-associated fibroblasts (CAFs) in many tumors. And, we obtained that TNFAIP8L1 expression was related with most of immune inhibitory and stimulatory genes in multiple types of tumors. We also found TNFAIP8L1 expression was correlated with most of chemokine, receptor, MHC, immunoinhibitor and immunostimulator gens in most of cancers. Moreover, we detected TNFAIP8L1 expression was associated with TMB and MSI in several tumors. Finally, TNFAIP8L1 gene had a significant positive association with 5 genes including BCL6B, DLL4, PCDH12, COL4A1 and DLL4 in the majority of tumors. GO enrichment and KEGG pathway analyses showed that TNFAIP8L1 in thepathogenesis of cancer may be related to “purine nucleoside binding,” “purine ribonucleoside binding,” “ECM-receptor interaction,” etc. Our first pan-cancer study may provide a deep comprehending of TNFAIP8L1 in tumoeigenesis from different tumors.

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Section: Discussionmentioning

confidence: 99%