With many bioactive non-ribosomal peptides and polyketides produced in fungi, studies of their biosyntheses are an active area of research. Practical limitations of working with mega-dalton synthetases including cell lysis and protein extraction to recombinant gene and pathway expression has slowed understanding of many secondary metabolic processes relative to bacterial counterparts. Recent advances in accessing fungal biosynthetic machinery are beginning to change this. Here we describe the successes of some studies of thiotemplate biosynthesis in fungal systems, along with very recent advances in chemical tagging and mass spectrometric strategies to selectively study biosynthetic conveyer belts in isolation, and within a few years, in endogenous fungal proteomes. Keywords fungal metabolism; nonribosomal peptide synthetases; polyketide synthases; thiotemplate biosynthesis; secondary metabolism; proteomics; mass spectrometry; Fourier-Transform mass spectrometry
IntroductionThe sustained examination of medicinally relevant natural products and their biosyntheses is driven by the need for new medicines that will selectively inhibit targets implicated in human disease. Drug discovery and synthesis are often inspired by new molecular scaffolds discovered in nature that can be used to probe and provide new information about biological © 2010 Elsevier Inc. All rights reserved * Corresponding author, kelleher@scs.uiuc.edu.Publisher's Disclaimer: This is a PDF file of an unedited manuscript that has been accepted for publication. As a service to our customers we are providing this early version of the manuscript. The manuscript will undergo copyediting, typesetting, and review of the resulting proof before it is published in its final citable form. Please note that during the production process errors may be discovered which could affect the content, and all legal disclaimers that apply to the journal pertain.
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Author ManuscriptFungal Genet Biol. Author manuscript; available in PMC 2012 January 1.
NIH-PA Author ManuscriptNIH-PA Author Manuscript NIH-PA Author Manuscript targets. In an effort to maximize the diversity of natural compounds isolated and to minimize the isolation of well-studied compounds, fungal systems offer a significant jump from thè simpler' world of natural product discovery in bacteria. Highly potent fungal molecules such as lovastatin, aflatoxin and fuminosin are reviewed, along with protein-based analysis techniques using mass spectrometry (MS) to evaluate their biosynthetic proteins and/or their small molecule products. Along with facile genome sequencing, such tools promise to increase the rate at which we can access and understand the ultra-large genes involved in production of non-ribosomal peptides and polyketides.Biosynthetic products span from essential primary metabolites such as fatty acids that make up the cell membrane to polyketides (PKs) and nonribosomal peptides (NRPs) that constitute pigments, antibiotics and siderophores. An often exploited mechanism of na...