2017
DOI: 10.1101/111146
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A practical guide for inferring reliable dominance hierarchies and estimating their uncertainty

Abstract: suggest that implementing simple procedures for estimating uncertainty will benefit 45 . Feb. 23, 2017; 3 researchers, and quantifying the shape of the dominance hierarchies will provide 46 new insights into the study organisms. CC-BY-NC-ND4.0 International license not peer-reviewed) is the author/funder. It is made available under a The copyright holder for this preprint (which was . http://dx.doi.org/10.1101/111146 doi: bioRxiv preprint first posted online 56 The R package "aniDom" allows easy estimatio… Show more

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Cited by 33 publications
(34 citation statements)
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“…Data on conflicts were recorded during continuous and ad libitum sampling for the same half-year period as the dyadic relationship measures. On average, we included in our analysis of dominance rank 13.7 and 16.3 interactions per individual in the two study periods respectively, which exceeds the value of 10 proposed for steep hierarchies (Sánchez-Tójar, Schroeder, & Farine, 2018). A winner/loser matrix of these interactions was used to calculate the standardized normalized David’s score (nDS) using DomiCalc (“compete” R-package; Schmid & de Vries, 2013).…”
Section: Methodsmentioning
confidence: 91%
“…Data on conflicts were recorded during continuous and ad libitum sampling for the same half-year period as the dyadic relationship measures. On average, we included in our analysis of dominance rank 13.7 and 16.3 interactions per individual in the two study periods respectively, which exceeds the value of 10 proposed for steep hierarchies (Sánchez-Tójar, Schroeder, & Farine, 2018). A winner/loser matrix of these interactions was used to calculate the standardized normalized David’s score (nDS) using DomiCalc (“compete” R-package; Schmid & de Vries, 2013).…”
Section: Methodsmentioning
confidence: 91%
“…All simulations were conducted in R version 3.3.3 (R Core Development Team 2017). We used the R package “animDom” version 0.1.2 to infer dominance hierarchies using the randomized Elo-rating method (Sánchez-Tójar et al 2017). The R package ‘statnet’ was used to test triangle transitivity measures (Handcock et al 2008).…”
Section: Methodsmentioning
confidence: 99%
“…An average sampling effort ranging from 10-20 interactions is sufficient to infer hierarchies in empirical networks (McDonald and Shizuka 2013). Furthermore, we compared the proportion of observed dyads to the expected proportion of dyads with the probability of interactions of equal group size following a Poisson distribution (Sánchez-Tójar et al 2017). We estimated the dominance hierarchy using the random Elo-rating method in order to track ranking dynamics over time.…”
Section: Methodsmentioning
confidence: 99%
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