Snappers (family Lutjanidae) are important fisheries target species and some species are known to form spawning aggregations at particular spawning grounds. The present study investigated the ecological characteristics of fish aggregations of two snapper species (checkered snapper Lutjanus decussatus and blackspot snapper L. fulviflamma) that form at a particular site. Specifically, the aims were to clarify (1) seasonality and lunar-phase periodicity of fish aggregation formation, (2) fine-scale spatial distribution of fish density (spatial variations of fish density at intervals of several-tens meters) within the aggregation site, (3) size and age frequency distributions of fishes in the aggregation site, (4) gonad development, (5) to compare fish abundance between inside and outside the aggregation site, and (6) to verify that fish aggregations of the two snapper species were spawning aggregation. Underwater observations using a 600 m × 5 m transect revealed that greater fish abundance of Lutjanus decussatus was found monthly between May and October, and clear positive peaks in the fish abundance were found only around the last-quarter moon. This lunar-related periodicity in the increase of fish abundance was confirmed by a time-series analysis (correlogram). Within the aggregation site, L. decussatus showed a relatively uniform distribution. In contrast, greater fish abundance of L. fulviflamma was found monthly between April and October, and clear positive peaks in the fish abundance were found around the last-quarter moon (April, May, June and October) or new moon (July, August and September). This lunar-related periodicity was also confirmed by correlogram. Lutjanus fulviflamma showed a relatively clumped distribution within the aggregation site. Most females of the two species in the aggregation site had hydrated eggs, indicating that the two species form aggregations for reproduction. The two species, although occurring simultaneously, are considered to form aggregations of conspecifics only. For L. decussatus, average fork length and age of males and females were 229.2 mm and 243.9 mm and 9.4 years and 8.1 years, respectively. For L. fulviflamma, average fork length and age of males and females were 233.9 mm and 246.9 mm and 6.8 years and 8.1 years, respectively. Fish abundance inside the aggregation site was 266.8-fold and 141557.1-fold greater than those outside the aggregation site for L. decussatus and L. fulviflamma, respectively. These results showed that (1) fish aggregation formation of the two snapper species was predictably repeated in particular months and lunar-phase, (2) it was predictably found at the particular site, (3) the fish abundance in the aggregation site markedly exceeded the fish abundance outside the aggregation site, and (4) the two species form aggregations for reproduction. Therefore, it is suggested that the fish aggregations for the two species can be regarded as spawning aggregations.