Introduction: Candida species are part of commensal microflora and etiological agents of different infections in humans. Fungal infections contribute to approximately one million deaths annually.Objective: The present study is to determine the distribution of yeast species and the risk factors of yeast colonization in the oral cavities of residents at 10 nursing homes in Taiwan.Methods: Oral rinses of residents were collected. All yeast isolates were subjected to the matrix-assisted laser desorption ionization time-of-flight mass spectrometry (MALDI-TOF MS) for species identification. The sequences of the internal transcribed spacer (ITS) region and/or the D1/D2 region of ribosomal DNA were used for assessing species identification.Results: Among 158 of 204 residents colonized by yeasts, 52 were colonized by Candida albicans alone and 106 were colonized by at least one non-C. albicans yeast species. Interestingly, 88 of the 158 subjects were colonized by more than one species. Among the 320 isolates, comprising 12 fungal genera and 33 species, C. albicans (40.3%) was the dominant species, followed by C. glabrata (15.9%), C. parapsilosis (10.6%), C. tropicalis (6.9%), and Trichosporon asahii (5.6%). Age, chewing betel nuts, having dentures, periodontal disease, or other chronic diseases are expected risk factors for being colonized by yeast. Interestingly, we also identified two less expected risk factors: being female and brushing teeth more than once a day. Furthermore, residents colonized by > 10 colony-forming unit (CFU) of yeast (OR, 6.156; 95% CI 2.709-13.989; p = 0.001) or age > 70 years (OR, 2.435; 95% CI 1.057-5.607; p = 0.037) were independent factors associated with multi-species colonization.