2017
DOI: 10.1007/978-1-4939-6996-8_10
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A Robust Lipidomics Workflow for Mammalian Cells, Plasma, and Tissue Using Liquid-Chromatography High-Resolution Tandem Mass Spectrometry

Abstract: Lipids have been analyzed in applications including drug discovery, disease etiology elucidation, and natural products. The chemical and structural diversity of lipids requires a tailored lipidomics workflow for each sample type. Therefore, every protocol in the lipidomics workflow, especially those involving sample preparation, should be optimized to avoid the introduction of bias. The coupling of ultra-high-performance liquid chromatography (UHPLC) with high-resolution mass spectrometry (HRMS) allows for the… Show more

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Cited by 39 publications
(30 citation statements)
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“…The lower phases were dried under nitrogen and the lipids extracted were solubilized in 200 µL isopropanol. A 1:4 dilution was used to perform lipidomics based on ultra-high performance liquid chromatography (HPLC) coupled to quadrupole-time of flight mass spectrometry (LC-HRMS2), as described previously with minor variations 43 . LC was performed on an HPLC 1290 (Agilent Technologies) and 1 µL of the lipid samples was separated at 55 °C on a C18 Hypersil Gold column (100 × 2.1 mm, 1.9 μm: Thermofisher) using an elution gradient consisting of a solution of 10 mM of ammonium formate and 0.1% formic acid (ACN:H 2 O, 60:40, v/v; solvent A), and a solution of 10 mM of ammonium formate and 0.1% formic acid (IPA:ACN:H 2 0, 90:8:2, v/v; solvent B).…”
Section: Generation Of Transgenic Plants and Vector Constructionsmentioning
confidence: 99%
“…The lower phases were dried under nitrogen and the lipids extracted were solubilized in 200 µL isopropanol. A 1:4 dilution was used to perform lipidomics based on ultra-high performance liquid chromatography (HPLC) coupled to quadrupole-time of flight mass spectrometry (LC-HRMS2), as described previously with minor variations 43 . LC was performed on an HPLC 1290 (Agilent Technologies) and 1 µL of the lipid samples was separated at 55 °C on a C18 Hypersil Gold column (100 × 2.1 mm, 1.9 μm: Thermofisher) using an elution gradient consisting of a solution of 10 mM of ammonium formate and 0.1% formic acid (ACN:H 2 O, 60:40, v/v; solvent A), and a solution of 10 mM of ammonium formate and 0.1% formic acid (IPA:ACN:H 2 0, 90:8:2, v/v; solvent B).…”
Section: Generation Of Transgenic Plants and Vector Constructionsmentioning
confidence: 99%
“…The lipids were resuspended in 200 μl of isopropanol. LC was performed based on a modified protocol from reference 71 . Briefly, a high-performance liquid chromatograph (HPLC) 1290 (Agilent Technologies) with a C 18 Hypersil gold column (100 mm by 2.1 mm, 1.9 μm; Thermo Fisher) at 50°C was used.…”
Section: Methodsmentioning
confidence: 99%
“…The lipids were resuspended in 200 µl of isopropanol. LC was performed based on a modified protocol from (65). Briefly an HPLC 1290 (Agilent Technologies) with a C18 Hypersil Gold (100 x 2.1 mm, 1.9 μm, Thermofisher) at 50°C was used.…”
Section: Methodsmentioning
confidence: 99%