Many schools still have manual or semi-automated business processes, which are not only inefficient but also prone to errors. How to use information technology, especially Uniform Identity Authentication (IDS) and microservices, to reconstruct these business flows to achieve the goal of improving efficiency and quality is an urgent one. This paper analyzes a smart campus business flow reconstruction algorithm based on IDS and microservices, introduces the concept of IDS and the theoretical basis of microservices architecture, and clarifies the important role of IDS in smart campus business flow. This paper emphasized the necessity of microservices architecture for business flow reconfiguration, discussed the main steps and methods of identity authentication mechanism reconfiguration and business flow reconfiguration, and pointed out the reconfiguration strategies based on IDS and microservices. Through the experimental test of the smart campus based on IDS and microservices, it was found that through the application of IDS, users could seamlessly switch between systems by logging in once, which greatly improved the user experience and work efficiency. The comprehensive performance score of the system was improved by approximately 10.1%. The smart campus business flow reconstruction algorithm based on IDS and microservices obviously optimized the business process, provides excellent and efficacious campus based solutions, and improves the efficiency of the campus service system as a whole. It has important theoretical significance and practical value for promoting the modern smart campus construction.