A spatial approach to matching marine fish diversity and abundance with habitat features

Chouinard, P.-M.; Dutil, Jean‐Denis; Proulx, Stephen R.; Borcard, Daniel; Crocker, Jeffrey B.

doi:10.1007/s10750-014-1861-1

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Mean or Median Richness?1

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2021

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“…The assumption thus far is that acquired richness data will be summarized as mean richness. While less commonly used, median richness (e.g., Chouinard et al, 2014; Krause & Culmsee, 2013) may be a useful alternative parameter of central tendency. As detailed in K2017, NGS is a long and complex procedure.…”

Section: Mean or Median Richness?mentioning

confidence: 99%

Rigorous quantification of bacterial richness in ticks: A case study

Holmes

2021

Molecular Ecology

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Kwan et al. (2017) published an informative study comparing results obtained by next‐generation sequencing (NGS) of mean bacterial genera richness among different life stages, male and female adults, and rearing conditions (field vs. laboratory) for Ixodes pacificus. The current paper examines Kwan et al. (2017) as a case study to provide guidance on statistical design and analysis for estimation of richness, derived from next generation sequencing technology, of the bacterial microbiome in field‐collected I. pacificus. Suggestions are provided to further strengthen quantification of microbiome richness in studies in ticks, with focus on sampling design. In‐depth treatment is provided of the relative merits of estimating mean richness versus median richness. Research on microbiome diversity in ticks can be made quantitatively rigorous; although, more research on methods is needed.

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Section: Mean or Median Richness?mentioning

confidence: 99%

Rigorous quantification of bacterial richness in ticks: A case study

Holmes

2021

Molecular Ecology

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show abstract

A spatial approach to matching marine fish diversity and abundance with habitat features

Cited by 1 publication

References 28 publications

Rigorous quantification of bacterial richness in ticks: A case study

Rigorous quantification of bacterial richness in ticks: A case study

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