Cyanase is an inducible enzyme in Escherichia coli that catalyzes the reaction of cyanate with bicarbonate to give two CO 2 molecules. The gene for cyanase is part of the cyn operon, which includes cynT and cynS, encoding carbonic anhydrase and cyanase, respectively. Carbonic anhydrase functions to prevent depletion of cellular bicarbonate during cyanate decomposition (the product CO 2 can diffuse out of the cell faster than noncatalyzed hydration back to bicarbonate). Addition of cyanate to the culture medium of a ⌬cynT mutant strain of E. coli (having a nonfunctional carbonic anhydrase) results in depletion of cellular bicarbonate, which leads to inhibition of growth and an inability to catalyze cyanate degradation. These effects can be overcome by aeration with a higher partial CO 2 pressure (M. B. Guilloton, A. F. Lamblin, E. I. Kozliak, M. Gerami-Nejad, C. Tu, D. Silverman, P. M. Anderson, and J. A. Fuchs, J. Bacteriol. 175:1443-1451, 1993). The question considered here is why depletion of bicarbonate/CO 2 due to the action of cyanase on cyanate in a ⌬cynT strain has such an inhibitory effect. Growth of wild-type E. coli in minimal medium under conditions of limited CO 2 was severely inhibited, and this inhibition could be overcome by adding certain Krebs cycle intermediates, indicating that one consequence of limiting CO 2 is inhibition of carboxylation reactions. However, supplementation of the growth medium with metabolites whose syntheses are known to depend on a carboxylation reaction was not effective in overcoming inhibition related to the bicarbonate deficiency induced in the ⌬cynT strain by addition of cyanate. Similar results were obtained with a ⌬cyn strain (since cyanase is absent, this strain does not develop a bicarbonate deficiency when cyanate is added); however, as with the ⌬cynT strain, a higher partial CO 2 pressure in the aerating gas or expression of carbonic anhydrase activity (which contributes to a higher intracellular concentration of bicarbonate/CO 2 ) significantly reduced inhibition of growth. There appears to be competition between cyanate and bicarbonate/CO 2 at some unknown but very important site such that cyanate binding inhibits growth. These results suggest that bicarbonate/CO 2 plays a significant role in the growth of E. coli other than simply as a substrate for carboxylation reactions and that strains with mutations in the cyn operon provide a unique model system for studying aspects of the metabolism of bicarbonate/CO 2 and its regulation in bacteria.Cyanase (EC 4.3.99.1) catalyzes the reaction of cyanate with bicarbonate to give two molecules CO 2 (15):The synthesis of cyanase in Escherichia coli is induced by addition of cyanate to the growth medium (2). The gene for cyanase is part of the cyn operon, which includes three genes in the order cynT, cynS, and cynX, encoding carbonic anhydrase, cyanase, and a hydrophobic protein of unknown function, respectively (11,(30)(31)(32)(33). The function of carbonic anhydrase appears to be to prevent depletion of cellular bicarb...