Aim: To identify a dose of imatinib that is safe and well tolerated by patients with pulmonary arterial hypertension (PAH) and offers therapeutic benefit with chronic administration. Background: PAH is an unmet clinical need. Imatinib, a tyrosine kinase inhibitor, 200 to 400mg daily reduces pulmonary artery pressure and increases functional capacity in this patient group, but is generally poorly tolerated at the higher dose. We hypothesise that there is a tolerated dose of imatinib that can be better targeted to patients who will benefit. We will explore whether the therapeutic response to Imatinib varies by genotype for the drugâs target proteins (e.g platelet-derived growth factor receptor beta - PDGFRB). Methods: The study consists of two parts, both open-label single-arm studies recruiting patients with PAH. Part 1 seeks to identify the best tolerated dose of Imatinib in the range from 100 and up to 400mg using a Bayesian Continuous Reassessment Method. Part 2 will measure efficacy after 24 weeks treatment with the best tolerated dose using a Simonâs two stage design. The primary efficacy endpoint is a binary variable. For patients with a baseline pulmonary vascular resistance (PVR) >1000 dynes·s·cm-5, success is defined by an absolute reduction in PVR of â¥300 dynes·s·cmâ5 at 24 weeks. For patients with a baseline PVR â¤1000 dynes·s·cmâ5, success is a 30% reduction in PVR at 24 weeks. PVR will also be evaluated as a continuous variable by genotype (e.g. at the cis-locus for PDGFRB with the sentinel variant rs230458) as an exploratory analysis. Conclusion: This study will define the best tolerated dose of Imatinib in patients with PAH and then study its efficacy in a single arm phase II design. Evaluating the response to that dose by genotype may inform a prospective biomarker-driven study.