This paper based on the analysis of system structure, uses the method of rate-variable fundamental in-tree of system dynamics, and establishes the feedback structure model of green supply chain management (GSCM) implementation system, using the minimum Archetype Generating set to generate the small feedback archetypes, and find out the dominant factors in the system. Through analyzing the feedback archetypes of the system, put forward to the countermeasures and measures to improve the quality of GSCM implementation.