The nanostructure of the main binding phase of the hydrated cements, the calcium silicate hydrates (C-S-H), and their structural changes due to aqueous carbonation have been characterized using TEM, nitrogen physisorption and SAXS. Synthetic C-S-H has been used for this purpose. Two different morphologies were identified, similar to the high density and low density C-S-H types. When submitting the sample to a CO 2 flux, the low density phase was completely carbonated. The carbonation by-products, calcium carbonate and silica gel were also identified and characterized. The precipitation of the silica gel increased the specific surface area from 95 m 2 /g to 132 m 2 /g, and its structure, formed by particles of ~5 nm typical radius was observed by small angle x-ray scattering.In addition, the resistance of the high density C-S-H to carbonation is reported and the passivating effect of the precipitated calcium carbonate is also discussed. Finally, the results have been compared with carbonation features observed in Portland cement 2 carbonated experimentally at downhole conditions.