“…Manifestation of these traits is thought to result from the interaction of diverged parental genes and result in hybrid incompatibly (Dobzhansky, 1936;Muller, 1942;Orr, 1995;reviewed in Bomblies et al, 2007;Rieseberg and Blackman, 2010;Maheshwari and Barbash, 2011). The molecular basis of hybrid incompatibility has been variously attributed to cisor trans-regulatory changes, copy number changes, and amino acid changes (Krüger et al, 2002;Bomblies et al, 2007;Dilkes et al, 2008;, and, thus far, there is little overlap between genes detected in one genus to another (reviewed in Rieseberg and Blackman, 2010). These interactions can affect different targets including pathogen responses (Bomblies et al, 2007;Jeuken et al, 2009;Yamamoto et al, 2010;Mizuno et al, 2011), suppression of transposable elements (TEs) (McClintock, 1984;Shaked et al, 2001;Kashkush et al, 2003;Madlung et al, 2005;Josefsson et al, 2006;Ungerer et al, 2006;Martienssen, 2010), small RNA pathways (Ha et al, 2009;Ng et al, 2012;Shivaprasad et al, 2012;Zhang et al, 2012), and developmental regulatory pathways, such as genomic imprinting in the seed (Josefsson et al, 2006).…”