Despite the wide knowledge about prevalent effects of ocean acidification on single species, the consequences on species interactions that may promote or prevent habitat shifts are still poorly understood. Using natural CO 2 vents, we investigated changes in a key tri-trophic chain embedded within all its natural complexity in seagrass systems. We found that seagrass habitats remain stable at vents despite the changes in their tri-trophic components. Under high pco 2 , the feeding of a key herbivore (sea urchin) on a less palatable seagrass and its associated epiphytes decreased, whereas the feeding on higher-palatable green algae increased. We also observed a doubled density of a predatory wrasse under acidified conditions. Bottom-up CO 2 effects interact with top-down control by predators to maintain the abundance of sea urchin populations under ambient and acidified conditions. The weakened urchin herbivory on a seagrass that was subjected to an intense fish herbivory at vents compensates the overall herbivory pressure on the habitat-forming seagrass. Overall plasticity of the studied system components may contribute to prevent habitat loss and to stabilize the system under acidified conditions. Thus, preserving the network of species interactions in seagrass ecosystems may help to minimize the impacts of ocean acidification in near-future oceans.www.nature.com/scientificreports www.nature.com/scientificreports/ due to eutrophication and/or the removal of predators that control herbivore populations by overfishing, either directly or indirectly via reduced control on small predators that feed on algae-removing mesograzers. We know comparatively less about changes in the strength of species interactions that may critically influence the persistence of seagrass ecosystems under ocean acidification.The Mediterranean endemic seagrass Posidonia oceanica forms complex systems with well-defined main trophic links. Two macroherbivores alone, the sea urchin Paracentrotus lividus and the sparid fish Sarpa salpa (commonly known as salema), may remove 50% of the annual seagrass productivity in shallow meadows 16 . In this study, we investigate mechanisms behind the change or stability of Posidonia habitats under ocean acidification. Particularly, we examined the interactions' strength under present (off-vent) and near-future OA conditions (CO 2 vents) of a tri-trophic food chain embedded within all its natural complexity. We studied multiple basal resources, one of the two main seagrass herbivores (sea urchin), and a territorial labrid fish that is known to predate on such herbivore 17,18 (Symphodus tinca, commonly known as peacock wrasse). Both consumers have restricted benthic home ranges, which ensures long-term exposure to high pCO 2 levels at the vent sites for them and their resources. Particularly, we investigated the strength of consumers' feeding by quantifying CNP stoichiometry, diet composition, trophic niche and position (stable isotope analysis (SIA)-based and diet-based), as well as the availability and pala...