The membrane topology of two alkane-inducible cytochromes P450 from the yeast Cundidu tropicalis, alkl and alk2, was tested by construction of fusion proteins with part of invertase and histidinol dehydrogenase (invHIS4C) and expression in a Saccharomyces cerevisiae his4 mutant. Depending on the localization of invHIS4C on the endoplasmic reticulum (ER) cytoplasmic or luminal side, the enzyme converts histidinol to histidine and allows the his4 yeast strain to grow on histidinol-supplemented medium. The N-terminal segments of alkl and alk2 were fused to invHIS4C at three different locations that follow the first alkl and alk2 transmembrane domains or a second putative transmembrane domain of alkl. The combination of this in vivo assay with subcellular immunoprecipitations of the expressed fusion proteins allowed us to establish that both P450s contain only one transmembrane domain with their N-terminus located in the ER lumen. Deletions performed in these fusion proteins removing the first transmembrane domain of alkl (ATM) resulted in a less efficient targeting to the ER membrane but did not prevent their insertion in these membranes. Furthermore deletion of a negatively charged peptide preceding the first alkl transmembrane domain (AL) in an invHIS4C protein fused after this domain caused the N-terminal to have a positive net charge and to be oriented in the cytoplasm thus translocating the remaining protein into the ER lumen. The presence of the second hydrophobic segment, however, prevented the complete translocation of this fusion protein into the ER lumen. This study describes the first assessment of P450 membrane topology using an in vivo technique.Cytochromes P450 (P450s) are ubiquitous hemoproteins found in plants, animals, fungi and prokaryotes and, when coupled with specific electron transport proteins, are capable of metabolizing exogenous and endogenous compounds. While known bacterial P450s are cytoplasmic soluble proteins, almost all eukaryotic P450s are membrane-bound and localized in the endoplasmic reticulum (ER) or in mitochondria. This characteristic has already been reported at early stages of investigations on P450s using sedimentation and membrane solubilization experiments [l , 21. Membrane topologies of ER-bound eukaryotic P450 were later proposed involving several (8 -10) transmembrane segments [3], when microsomal P450 primary sequences became available. Recently, using a combination of recombinant DNA technology and in vitro techniques, it was demonstrated that minima of 20-30 N-terminal amino acids of two microsomal rabbit P4SOs and rat P450, IIB1, were sufficient for membrane in- sertion and contained a halt-transfer signal preventing translocation of the protein through the ER [4-61. The same studies also showed that the N-terminal of IIB1 could be assigned to the ER lumen [6]. However, it is still not certain whether the N-terminal segment of microsomal P450s contains a single membrane-spanning domain or two transmembrane domains in a hairpin loop configuration. Immunocytological ...