Korea is in the low-prevalence area of -thalassemia and the Korean population has relatively homogenous racial characteristics. Recently, we identified some causative mutations of the Korean -thalassemia patients. In order to elucidate the genetic background of -thalassemia alleles in Koreans, we determined the restriction fragment length polymorphism (RFLP)-haplotype and framework (FW) in nine -thalassemia chromosomes of five different causative mutations by PCR-based method and family linkage study. The result that the haplotype and the framework linked to the initiation codon ATG→AGG mutation were -+-++-+ and FW3A, respectively, in all of three families in this study suggests a common origin of this mutation at least in Koreans. A novel -thalassemia mutation, codons 89/90 -TG, showed discrepancy between -++-++-and FW1, which could be explained by gene conversion. A case of codons 8/9 +G frameshift mutation had +----++ and FW1. The linkage of the two -thalassemia mutations, codon 17 AAG→TAG and codons 41/42 -TTCT, with specific haplotypes and frameworks common to the Koreans and the neighboring countries suggests that those mutations are influenced by the genetic flow from the south China.